RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
SMC1A-204ENST00000463684 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMC1A-204ENST00000463684 GRM1Q13255 1194 aa19.29■□□□□ 0.68
SMC1A-204ENST00000463684 TAF7Q15545 349 aaPredicted RBP19.29■□□□□ 0.68
SMC1A-204ENST00000463684 FAM161AQ3B820 660 aa19.29■□□□□ 0.68
SMC1A-204ENST00000463684 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
SMC1A-204ENST00000463684 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
SMC1A-204ENST00000463684 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
SMC1A-204ENST00000463684 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
SMC1A-204ENST00000463684 EPS15P42566 896 aa19.28■□□□□ 0.68
SMC1A-204ENST00000463684 DCTN1Q14203 1278 aa19.28■□□□□ 0.68
SMC1A-204ENST00000463684 USP50Q70EL3 339 aaPredicted RBP19.28■□□□□ 0.68
SMC1A-204ENST00000463684 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
SMC1A-204ENST00000463684 CCDC85CA6NKD9 419 aa19.27■□□□□ 0.68
SMC1A-204ENST00000463684 ERVV-1B6SEH8 477 aa19.27■□□□□ 0.68
SMC1A-204ENST00000463684 RBM17Q96I25 401 aaKnown RBP19.27■□□□□ 0.68
SMC1A-204ENST00000463684 SLC34A2O95436 690 aa19.26■□□□□ 0.67
SMC1A-204ENST00000463684 SCNN1DP51172 638 aa19.26■□□□□ 0.67
SMC1A-204ENST00000463684 FMR1Q06787 632 aaKnown RBP eCLIP19.26■□□□□ 0.675e-7■■□□□ 14.3
SMC1A-204ENST00000463684 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
SMC1A-204ENST00000463684 KIF6Q6ZMV9 814 aa19.26■□□□□ 0.67
SMC1A-204ENST00000463684 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
SMC1A-204ENST00000463684 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
SMC1A-204ENST00000463684 MLLT1Q03111 559 aaPredicted RBP19.25■□□□□ 0.67
SMC1A-204ENST00000463684 NIM1KQ8IY84 436 aa19.25■□□□□ 0.67
SMC1A-204ENST00000463684 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
SMC1A-204ENST00000463684 ABCC12Q96J65 1359 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
SMC1A-204ENST00000463684 CST9Q5W186 159 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 CRAMP1Q96RY5 1269 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 RRP7AQ9Y3A4 280 aaKnown RBP19.24■□□□□ 0.67
SMC1A-204ENST00000463684 TLL2Q9Y6L7 1015 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 SNED1Q8TER0 1413 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
SMC1A-204ENST00000463684 TRAF5O00463 557 aa19.23■□□□□ 0.67
SMC1A-204ENST00000463684 PPEF1O14829 653 aaPredicted RBP19.23■□□□□ 0.67
SMC1A-204ENST00000463684 GPTP24298 496 aa19.23■□□□□ 0.67
SMC1A-204ENST00000463684 MAP2K2P36507 400 aa19.23■□□□□ 0.67
SMC1A-204ENST00000463684 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
SMC1A-204ENST00000463684 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
SMC1A-204ENST00000463684 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
SMC1A-204ENST00000463684 NEFMP07197 916 aa19.21■□□□□ 0.67
SMC1A-204ENST00000463684 SUSD4Q5VX71 490 aa19.21■□□□□ 0.67
SMC1A-204ENST00000463684 TTLL7Q6ZT98 887 aa19.21■□□□□ 0.67
SMC1A-204ENST00000463684 VPS33BQ9H267 617 aa19.21■□□□□ 0.67
SMC1A-204ENST00000463684 CA12O43570 354 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 MYL6BP14649 208 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 RGS19P49795 217 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 PPP1R42Q7Z4L9 355 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 ZBTB3Q9H5J0 574 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 GPRC5DQ9NZD1 345 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 COL4A5P29400 1685 aa19.2■□□□□ 0.66
SMC1A-204ENST00000463684 IBTKQ9P2D0 1353 aaPredicted RBP19.19■□□□□ 0.66
SMC1A-204ENST00000463684 RIC1Q4ADV7 1423 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 AOC2O75106 756 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 AOC3Q16853 763 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 TSKSQ9UJT2 592 aa19.19■□□□□ 0.66
SMC1A-204ENST00000463684 CELF2O95319 508 aaKnown RBP19.18■□□□□ 0.66
SMC1A-204ENST00000463684 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 SAPCD2Q86UD0 394 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 ZNRF3Q9ULT6 936 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 ATP6V0A2Q9Y487 856 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 UBN2Q6ZU65 1347 aa19.18■□□□□ 0.66
SMC1A-204ENST00000463684 LTBP1Q14766 1721 aa19.17■□□□□ 0.66
SMC1A-204ENST00000463684 EIF4A1P60842 406 aaKnown RBP19.17■□□□□ 0.66
SMC1A-204ENST00000463684 GIGYF2Q6Y7W6 1299 aaKnown RBP19.17■□□□□ 0.66
SMC1A-204ENST00000463684 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
SMC1A-204ENST00000463684 NTSR2O95665 410 aa19.16■□□□□ 0.66
SMC1A-204ENST00000463684 CXCL9Q07325 125 aa19.16■□□□□ 0.66
SMC1A-204ENST00000463684 PARP10Q53GL7 1025 aa19.16■□□□□ 0.66
SMC1A-204ENST00000463684 HHIPL1Q96JK4 782 aa19.16■□□□□ 0.66
SMC1A-204ENST00000463684 GMPSP49915 693 aaPredicted RBP19.15■□□□□ 0.66
SMC1A-204ENST00000463684 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
SMC1A-204ENST00000463684 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
SMC1A-204ENST00000463684 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
SMC1A-204ENST00000463684 BRPF1P55201 1214 aaPredicted RBP19.14■□□□□ 0.65
SMC1A-204ENST00000463684 TNIP1Q15025 636 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 CIAPIN1Q6FI81 312 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
SMC1A-204ENST00000463684 C3orf67Q6ZVT6 689 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 ZC3H15Q8WU90 426 aaKnown RBP19.14■□□□□ 0.65
SMC1A-204ENST00000463684 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
SMC1A-204ENST00000463684 GLIS2Q9BZE0 524 aaPredicted RBP19.14■□□□□ 0.65
SMC1A-204ENST00000463684 MCOLN1Q9GZU1 580 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 ZNF408Q9H9D4 720 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 PGAP2Q9UHJ9 254 aa19.14■□□□□ 0.65
SMC1A-204ENST00000463684 BBOX1O75936 387 aa19.13■□□□□ 0.65
SMC1A-204ENST00000463684 SLC10A5Q5PT55 438 aa19.13■□□□□ 0.65
SMC1A-204ENST00000463684 CDC37L1Q7L3B6 337 aa19.13■□□□□ 0.65
SMC1A-204ENST00000463684 RTFDC1Q9BY42 306 aaPredicted RBP19.13■□□□□ 0.65
SMC1A-204ENST00000463684 ERBB4Q15303 1308 aa19.12■□□□□ 0.65
SMC1A-204ENST00000463684 CDHR2Q9BYE9 1310 aa19.12■□□□□ 0.65
SMC1A-204ENST00000463684 SP8Q8IXZ3 490 aa19.12■□□□□ 0.65
SMC1A-204ENST00000463684 MPNDQ8N594 471 aa19.12■□□□□ 0.65
SMC1A-204ENST00000463684 DGKZQ13574 1117 aa19.11■□□□□ 0.65
SMC1A-204ENST00000463684 ABCC4O15439 1325 aa19.1■□□□□ 0.65
SMC1A-204ENST00000463684 NUP98P52948 1817 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms