RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 NYXQ9GZU5 481 aa25.78■■□□□ 1.72
NUP43-205ENST00000463048 CD2APQ9Y5K6 639 aa25.78■■□□□ 1.72
NUP43-205ENST00000463048 IGKV5-2P06315 115 aa25.77■■□□□ 1.72
NUP43-205ENST00000463048 A0A0G2JLW4 131 aa25.76■■□□□ 1.71
NUP43-205ENST00000463048 CHRNA5P30532 468 aa25.76■■□□□ 1.71
NUP43-205ENST00000463048 PTPRCP08575 1304 aa25.76■■□□□ 1.71
NUP43-205ENST00000463048 ABCC12Q96J65 1359 aa25.76■■□□□ 1.71
NUP43-205ENST00000463048 N4BP2Q86UW6 1770 aaPredicted RBP25.76■■□□□ 1.71
NUP43-205ENST00000463048 FAM89AQ96GI7 184 aa25.75■■□□□ 1.71
NUP43-205ENST00000463048 CWC25Q9NXE8 425 aaPredicted RBP25.75■■□□□ 1.71
NUP43-205ENST00000463048 ANKRD31Q8N7Z5 1873 aa25.74■■□□□ 1.71
NUP43-205ENST00000463048 DPEP1P16444 411 aa25.74■■□□□ 1.71
NUP43-205ENST00000463048 KIF13BQ9NQT8 1826 aa25.74■■□□□ 1.71
NUP43-205ENST00000463048 KIF16BQ96L93 1317 aa25.73■■□□□ 1.71
NUP43-205ENST00000463048 NEURL1BA8MQ27 555 aa25.73■■□□□ 1.71
NUP43-205ENST00000463048 HCLS1P14317 486 aaPredicted RBP25.73■■□□□ 1.71
NUP43-205ENST00000463048 PELP1Q8IZL8 1130 aaKnown RBP25.73■■□□□ 1.71
NUP43-205ENST00000463048 TNNQ9UQP3 1299 aa25.73■■□□□ 1.71
NUP43-205ENST00000463048 C2CD5Q86YS7 1000 aa25.72■■□□□ 1.71
NUP43-205ENST00000463048 CCDC191Q8NCU4 936 aa25.72■■□□□ 1.71
NUP43-205ENST00000463048 BRIP1Q9BX63 1249 aa25.72■■□□□ 1.71
NUP43-205ENST00000463048 RCAN3Q9UKA8 241 aa25.72■■□□□ 1.71
NUP43-205ENST00000463048 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
NUP43-205ENST00000463048 IBTKQ9P2D0 1353 aaPredicted RBP25.71■■□□□ 1.71
NUP43-205ENST00000463048 TNRC6CQ9HCJ0 1690 aaKnown RBP25.71■■□□□ 1.71
NUP43-205ENST00000463048 TRIM28Q13263 835 aaKnown RBP25.71■■□□□ 1.71
NUP43-205ENST00000463048 BEND3Q5T5X7 828 aa25.71■■□□□ 1.71
NUP43-205ENST00000463048 LINS1Q8NG48 757 aa25.71■■□□□ 1.71
NUP43-205ENST00000463048 SH3TC1Q8TE82 1336 aa25.7■■□□□ 1.71
NUP43-205ENST00000463048 PDE6BP35913 854 aa25.7■■□□□ 1.7
NUP43-205ENST00000463048 BRPF1P55201 1214 aaPredicted RBP25.7■■□□□ 1.7
NUP43-205ENST00000463048 KIAA1551Q9HCM1 1747 aa25.7■■□□□ 1.7
NUP43-205ENST00000463048 TGFB2P61812 414 aa25.69■■□□□ 1.7
NUP43-205ENST00000463048 C3orf67Q6ZVT6 689 aa25.69■■□□□ 1.7
NUP43-205ENST00000463048 CLUAP1Q96AJ1 413 aa25.69■■□□□ 1.7
NUP43-205ENST00000463048 API5Q9BZZ5 524 aaKnown RBP25.69■■□□□ 1.7
NUP43-205ENST00000463048 SRCIN1Q9C0H9 1055 aa25.69■■□□□ 1.7
NUP43-205ENST00000463048 H0YIN7 160 aa25.68■■□□□ 1.7
NUP43-205ENST00000463048 GCKRQ14397 625 aa25.68■■□□□ 1.7
NUP43-205ENST00000463048 ZNF622Q969S3 477 aaKnown RBP eCLIP25.68■■□□□ 1.7
NUP43-205ENST00000463048 IPO8O15397 1037 aaKnown RBP25.67■■□□□ 1.7
NUP43-205ENST00000463048 COL11A2P13942 1736 aaPredicted RBP25.67■■□□□ 1.7
NUP43-205ENST00000463048 UBE3BQ7Z3V4 1068 aa25.67■■□□□ 1.7
NUP43-205ENST00000463048 ZBTB38Q8NAP3 1195 aaPredicted RBP25.67■■□□□ 1.7
NUP43-205ENST00000463048 IRS4O14654 1257 aaPredicted RBP25.66■■□□□ 1.7
NUP43-205ENST00000463048 PCCAP05165 728 aaPredicted RBP25.66■■□□□ 1.7
NUP43-205ENST00000463048 TRIM27P14373 513 aa25.66■■□□□ 1.7
NUP43-205ENST00000463048 ZKSCAN2Q63HK3 967 aa25.66■■□□□ 1.7
NUP43-205ENST00000463048 KCNA3P22001 575 aa25.65■■□□□ 1.7
NUP43-205ENST00000463048 ATF7IPQ6VMQ6 1270 aa25.65■■□□□ 1.7
NUP43-205ENST00000463048 RNF123Q5XPI4 1314 aa25.64■■□□□ 1.7
NUP43-205ENST00000463048 DDX60Q8IY21 1712 aaKnown RBP25.64■■□□□ 1.7
NUP43-205ENST00000463048 NLRP3Q96P20 1036 aa25.64■■□□□ 1.7
NUP43-205ENST00000463048 PLIN1O60240 522 aa25.63■■□□□ 1.69
NUP43-205ENST00000463048 SLC10A5Q5PT55 438 aa25.63■■□□□ 1.69
NUP43-205ENST00000463048 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
NUP43-205ENST00000463048 C9orf78Q9NZ63 289 aaPredicted RBP25.63■■□□□ 1.69
NUP43-205ENST00000463048 ALDH1L1O75891 902 aa25.62■■□□□ 1.69
NUP43-205ENST00000463048 RPGRQ92834 1020 aaKnown RBP25.62■■□□□ 1.69
NUP43-205ENST00000463048 CCDC85AQ96PX6 553 aaPredicted RBP25.62■■□□□ 1.69
NUP43-205ENST00000463048 PIM2Q9P1W9 311 aa25.62■■□□□ 1.69
NUP43-205ENST00000463048 ZNF219Q9P2Y4 722 aaPredicted RBP25.62■■□□□ 1.69
NUP43-205ENST00000463048 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
NUP43-205ENST00000463048 LAMB2P55268 1798 aa25.61■■□□□ 1.69
NUP43-205ENST00000463048 H7C1W4 665 aa25.61■■□□□ 1.69
NUP43-205ENST00000463048 SRGNP10124 158 aa25.61■■□□□ 1.69
NUP43-205ENST00000463048 GPR162Q16538 588 aa25.61■■□□□ 1.69
NUP43-205ENST00000463048 CACNA1SQ13698 1873 aa25.6■■□□□ 1.69
NUP43-205ENST00000463048 GRM8O00222 908 aa25.6■■□□□ 1.69
NUP43-205ENST00000463048 CCT4P50991 539 aaKnown RBP25.6■■□□□ 1.69
NUP43-205ENST00000463048 NPR1P16066 1061 aa25.59■■□□□ 1.69
NUP43-205ENST00000463048 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
NUP43-205ENST00000463048 MASTLQ96GX5 879 aa25.59■■□□□ 1.69
NUP43-205ENST00000463048 RIC1Q4ADV7 1423 aa25.59■■□□□ 1.69
NUP43-205ENST00000463048 ABCC4O15439 1325 aa25.59■■□□□ 1.69
NUP43-205ENST00000463048 DLEC1Q9Y238 1755 aa25.59■■□□□ 1.69
NUP43-205ENST00000463048 KLRG2A4D1S0 409 aaPredicted RBP25.58■■□□□ 1.69
NUP43-205ENST00000463048 YBX3P16989 372 aaKnown RBP eCLIP25.58■■□□□ 1.696e-11■□□□□ 9.7
NUP43-205ENST00000463048 DALRD3Q5D0E6 543 aaKnown RBP25.58■■□□□ 1.69
NUP43-205ENST00000463048 CDHR2Q9BYE9 1310 aa25.58■■□□□ 1.69
NUP43-205ENST00000463048 PDE8AO60658 829 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 NBPF7P0C2Y1 421 aaPredicted RBP25.57■■□□□ 1.68
NUP43-205ENST00000463048 CASP7P55210 303 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 STYK1Q6J9G0 422 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 TMEM57Q8N5G2 664 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 TTLL6Q8N841 843 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
NUP43-205ENST00000463048 BRCA1P38398 1863 aaKnown RBP25.57■■□□□ 1.68
NUP43-205ENST00000463048 CRY2Q49AN0 593 aa25.56■■□□□ 1.68
NUP43-205ENST00000463048 DZIP1LQ8IYY4 767 aaKnown RBP25.56■■□□□ 1.68
NUP43-205ENST00000463048 PANK1Q8TE04 598 aa25.56■■□□□ 1.68
NUP43-205ENST00000463048 RLBP1P12271 317 aa25.55■■□□□ 1.68
NUP43-205ENST00000463048 RBM17Q96I25 401 aaKnown RBP25.55■■□□□ 1.68
NUP43-205ENST00000463048 DCAF8L1A6NGE4 600 aa25.54■■□□□ 1.68
NUP43-205ENST00000463048 HSP90B1P14625 803 aaKnown RBP25.54■■□□□ 1.68
NUP43-205ENST00000463048 INTS3Q68E01 1043 aaKnown RBP25.54■■□□□ 1.68
NUP43-205ENST00000463048 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
NUP43-205ENST00000463048 CNKSR1Q969H4 720 aa25.54■■□□□ 1.68
NUP43-205ENST00000463048 USP44Q9H0E7 712 aa25.54■■□□□ 1.68
NUP43-205ENST00000463048 TAF1P21675 1872 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms