RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DRC7Q8IY82 874 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 PDCL2Q8N4E4 241 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 MPNDQ8N594 471 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 PI4KAP1Q8N8J0 262 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 SPC24Q8NBT2 197 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 RGS22Q8NE09 1264 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 KIAA1524Q8TCG1 905 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 LTV1Q96GA3 475 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 SLC26A8Q96RN1 970 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 ARID3AQ99856 593 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 FSD1Q9BTV5 496 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 TNMDQ9H2S6 317 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 CLSTN2Q9H4D0 955 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 DBF4Q9UBU7 674 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-204ENST00000462604 PYCARDQ9ULZ3 195 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 NCAPD2Q15021 1401 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 NALCNQ8IZF0 1738 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 NPHP3Q7Z494 1330 aa4.17□□□□□ -1.74
COL8A1-204ENST00000462604 MYO5BQ9ULV0 1848 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ADCY9O60503 1353 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 RFX7Q2KHR2 1363 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 DIP2AQ14689 1571 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 OVOS2A0A0G2JMS6 1433 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 BTBD11A6QL63 1104 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 SMTNL1A8MU46 457 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 H3BQV1 296 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 NEMFO60524 1076 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 NBPF7P0C2Y1 421 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 RPS6KB1P23443 525 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 CDC25BP30305 580 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ZNF75DP51815 510 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 PTH1RQ03431 593 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 NMIQ13287 307 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 SYCP1Q15431 976 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ME3Q16798 604 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ADCK5Q3MIX3 580 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ANO6Q4KMQ2 910 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 AMOTQ4VCS5 1084 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 PPP4R3BQ5MIZ7 849 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 IFFO2Q5TF58 517 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 KSR2Q6VAB6 950 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 CDC37L1Q7L3B6 337 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 HS6ST3Q8IZP7 471 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ZNF710Q8N1W2 664 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 C17orf53Q8N3J3 647 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 USHBP1Q8N6Y0 703 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ABTB2Q8N961 1025 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 NECAB1Q8N987 351 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 TDRD7Q8NHU6 1098 aaKnown RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 BICD2Q8TD16 824 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 IP6K1Q92551 441 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 MAP4K1Q92918 833 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 CHMP4CQ96CF2 233 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 SPATA32Q96LK8 384 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 LARP6Q9BRS8 491 aaKnown RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 ALDH8A1Q9H2A2 487 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 KCNF1Q9H3M0 494 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 BCL2L12Q9HB09 334 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 SNRKQ9NRH2 765 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 TPCN1Q9ULQ1 816 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 MAP3K2Q9Y2U5 619 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 MRVI1Q9Y6F6 885 aa4.16□□□□□ -1.74
COL8A1-204ENST00000462604 U3KPZ7 1027 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 FAM208AQ9UK61 1670 aaKnown RBP4.16□□□□□ -1.74
COL8A1-204ENST00000462604 MED23Q9ULK4 1368 aa4.15□□□□□ -1.74
COL8A1-204ENST00000462604 NWD1Q149M9 1564 aa4.15□□□□□ -1.74
COL8A1-204ENST00000462604 GOLGA6L19H0YKK7 550 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 GRM8O00222 908 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 RIOK3O14730 519 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CTAGE5O15320 804 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 RNMTO43148 476 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 GIGYF1O75420 1035 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 HSP90B1P14625 803 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 LIG1P18858 919 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 PTGS1P23219 599 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 DMTNQ08495 405 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 ST3GAL1Q11201 340 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 NECTIN1Q15223 517 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 STX1AQ16623 288 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 NUTM2GQ5VZR2 741 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC73Q6ZRK6 1079 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 TTC6Q86TZ1 520 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 FERMT3Q86UX7 667 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 LUZP1Q86V48 1076 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 PLA2G4DQ86XP0 818 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 THEMISQ8N1K5 641 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 KCNH5Q8NCM2 988 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC112Q8NEF3 446 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 LINS1Q8NG48 757 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 ZC3H15Q8WU90 426 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 LEO1Q8WVC0 666 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 FAM227BQ96M60 508 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 TRIM5Q9C035 493 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 ZSCAN16Q9H4T2 348 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CBX8Q9HC52 389 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 DACT1Q9NYF0 836 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CGNQ9P2M7 1197 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 CFAP45Q9UL16 551 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms