RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FKBP5Q13451 457 aaPredicted RBP8.02□□□□□ -1.13
COPS3-204ENST00000462236 MLECQ14165 292 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 RNF217Q8TC41 542 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 VTI1AQ96AJ9 217 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
COPS3-204ENST00000462236 EGFL7Q9UHF1 273 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 KIF14Q15058 1648 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 NOS2P35228 1153 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 C1orf53Q5VUE5 145 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 FAM9AQ8IZU1 332 aaPredicted RBP8.01□□□□□ -1.13
COPS3-204ENST00000462236 SENP2Q9HC62 589 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 ATP13A2Q9NQ11 1180 aa8.01□□□□□ -1.13
COPS3-204ENST00000462236 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
COPS3-204ENST00000462236 CDK13Q14004 1512 aaKnown RBP8.01□□□□□ -1.13
COPS3-204ENST00000462236 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
COPS3-204ENST00000462236 ITSN2Q9NZM3 1697 aa8□□□□□ -1.13
COPS3-204ENST00000462236 TRIM26Q12899 539 aaPredicted RBP8□□□□□ -1.13
COPS3-204ENST00000462236 KIFC2Q96AC6 838 aa8□□□□□ -1.13
COPS3-204ENST00000462236 ZFP42Q96MM3 310 aa8□□□□□ -1.13
COPS3-204ENST00000462236 CABP1Q9NZU7 370 aa8□□□□□ -1.13
COPS3-204ENST00000462236 TRAPPC8Q9Y2L5 1435 aa8□□□□□ -1.13
COPS3-204ENST00000462236 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
COPS3-204ENST00000462236 CAMSAP1Q5T5Y3 1602 aa8□□□□□ -1.13
COPS3-204ENST00000462236 EML1O00423 815 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 BMP1P13497 986 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 MED1Q15648 1581 aaPredicted RBP7.99□□□□□ -1.13
COPS3-204ENST00000462236 NBPF10Q6P3W6 841 aaKnown RBP7.99□□□□□ -1.13
COPS3-204ENST00000462236 L3MBTL2Q969R5 705 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 USP3Q9Y6I4 520 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 IVNS1ABPQ9Y6Y0 642 aa7.99□□□□□ -1.13
COPS3-204ENST00000462236 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
COPS3-204ENST00000462236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.98□□□□□ -1.13
COPS3-204ENST00000462236 NBPF1Q3BBV0 1214 aa7.98□□□□□ -1.13
COPS3-204ENST00000462236 C4orf17Q53FE4 359 aa7.98□□□□□ -1.13
COPS3-204ENST00000462236 TBCELQ5QJ74 424 aa7.98□□□□□ -1.13
COPS3-204ENST00000462236 ZDHHC1Q8WTX9 485 aa7.98□□□□□ -1.13
COPS3-204ENST00000462236 MYO19Q96H55 970 aa7.98□□□□□ -1.13
COPS3-204ENST00000462236 PREX2Q70Z35 1606 aa7.97□□□□□ -1.13
COPS3-204ENST00000462236 LGR5O75473 907 aa7.97□□□□□ -1.13
COPS3-204ENST00000462236 HIF1AQ16665 826 aa7.97□□□□□ -1.13
COPS3-204ENST00000462236 ZNF232Q9UNY5 417 aa7.97□□□□□ -1.13
COPS3-204ENST00000462236 TCOF1Q13428 1488 aaKnown RBP7.97□□□□□ -1.13
COPS3-204ENST00000462236 CDC42BPAQ5VT25 1732 aa7.97□□□□□ -1.13
COPS3-204ENST00000462236 MYO3AQ8NEV4 1616 aa7.96□□□□□ -1.13
COPS3-204ENST00000462236 NPATQ14207 1427 aa7.96□□□□□ -1.13
COPS3-204ENST00000462236 PLA2R1Q13018 1463 aa7.96□□□□□ -1.13
COPS3-204ENST00000462236 POLR1AO95602 1720 aaPredicted RBP7.96□□□□□ -1.14
COPS3-204ENST00000462236 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
COPS3-204ENST00000462236 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
COPS3-204ENST00000462236 RTN1Q16799 776 aa7.96□□□□□ -1.14
COPS3-204ENST00000462236 C16orf46Q6P387 395 aa7.96□□□□□ -1.14
COPS3-204ENST00000462236 ABCC1P33527 1531 aa7.96□□□□□ -1.14
COPS3-204ENST00000462236 CNTLNQ9NXG0 1405 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 TATP17735 454 aaPredicted RBP7.95□□□□□ -1.14
COPS3-204ENST00000462236 PLA2G4AP47712 749 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 POU4F2Q12837 409 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 EFCAB2Q5VUJ9 269 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 PRICKLE2Q7Z3G6 844 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 HELQQ8TDG4 1101 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 GTF3C2Q8WUA4 911 aaPredicted RBP7.95□□□□□ -1.14
COPS3-204ENST00000462236 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
COPS3-204ENST00000462236 SOWAHDA6NJG2 315 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 MAN1A2O60476 641 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 NPR3P17342 541 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 FKBP4Q02790 459 aaKnown RBP eCLIP7.94□□□□□ -1.14
COPS3-204ENST00000462236 SND1Q7KZF4 910 aaKnown RBP eCLIP7.94□□□□□ -1.14
COPS3-204ENST00000462236 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 TRIM47Q96LD4 638 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 MKNK1Q9BUB5 465 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 TIMMDC1Q9NPL8 285 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 SEPT3Q9UH03 358 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 DYRK1BQ9Y463 629 aa7.94□□□□□ -1.14
COPS3-204ENST00000462236 CLTCQ00610 1675 aaKnown RBP7.94□□□□□ -1.14
COPS3-204ENST00000462236 CEP170BQ9Y4F5 1589 aaPredicted RBP7.93□□□□□ -1.14
COPS3-204ENST00000462236 ICMTO60725 284 aa7.93□□□□□ -1.14
COPS3-204ENST00000462236 AFAP1Q8N556 730 aa7.93□□□□□ -1.14
COPS3-204ENST00000462236 PHACTR1Q9C0D0 580 aa7.93□□□□□ -1.14
COPS3-204ENST00000462236 GZF1Q9H116 711 aaPredicted RBP7.93□□□□□ -1.14
COPS3-204ENST00000462236 QTRT2Q9H974 415 aaKnown RBP7.93□□□□□ -1.14
COPS3-204ENST00000462236 ZNF335Q9H4Z2 1342 aaPredicted RBP7.93□□□□□ -1.14
COPS3-204ENST00000462236 TROQ12816 1431 aaPredicted RBP7.93□□□□□ -1.14
COPS3-204ENST00000462236 ARHGAP5Q13017 1502 aa7.93□□□□□ -1.14
COPS3-204ENST00000462236 PLXNC1O60486 1568 aa7.93□□□□□ -1.14
COPS3-204ENST00000462236 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 SERPINB4P48594 390 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 LBRQ14739 615 aaKnown RBP7.92□□□□□ -1.14
COPS3-204ENST00000462236 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 COX20Q5RI15 118 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 Q6ZNB5 142 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 HCN4Q9Y3Q4 1203 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 PARP3Q9Y6F1 533 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 NEURL4Q96JN8 1562 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 STRCP1A6NGW2 1772 aa7.92□□□□□ -1.14
COPS3-204ENST00000462236 FAM13AO94988 1023 aa7.91□□□□□ -1.14
COPS3-204ENST00000462236 BRD2P25440 801 aaKnown RBP7.91□□□□□ -1.14
COPS3-204ENST00000462236 PHKA2P46019 1235 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms