RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 NPR1P16066 1061 aa23.26■■□□□ 1.31
RER1-206ENST00000462129 CLEC11AQ9Y240 323 aa23.26■■□□□ 1.31
RER1-206ENST00000462129 ZNF652Q9Y2D9 606 aa23.26■■□□□ 1.31
RER1-206ENST00000462129 KDM3BQ7LBC6 1761 aa23.26■■□□□ 1.31
RER1-206ENST00000462129 CHL1O00533 1208 aa23.25■■□□□ 1.31
RER1-206ENST00000462129 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
RER1-206ENST00000462129 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
RER1-206ENST00000462129 PRAMEF22A3QJZ6 481 aa23.24■■□□□ 1.31
RER1-206ENST00000462129 ITGBL1O95965 494 aaPredicted RBP23.24■■□□□ 1.31
RER1-206ENST00000462129 OLFM4Q6UX06 510 aa23.24■■□□□ 1.31
RER1-206ENST00000462129 CLEC4GQ6UXB4 293 aa23.24■■□□□ 1.31
RER1-206ENST00000462129 E9PSI1 815 aa23.23■■□□□ 1.31
RER1-206ENST00000462129 EPHX2P34913 555 aa23.23■■□□□ 1.31
RER1-206ENST00000462129 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
RER1-206ENST00000462129 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
RER1-206ENST00000462129 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
RER1-206ENST00000462129 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
RER1-206ENST00000462129 NIP7Q9Y221 180 aaKnown RBP eCLIP23.22■■□□□ 1.31
RER1-206ENST00000462129 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
RER1-206ENST00000462129 ZNF521Q96K83 1311 aa23.22■■□□□ 1.31
RER1-206ENST00000462129 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
RER1-206ENST00000462129 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
RER1-206ENST00000462129 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
RER1-206ENST00000462129 LBX1P52954 281 aa23.2■■□□□ 1.3
RER1-206ENST00000462129 EIF4A1P60842 406 aaKnown RBP23.2■■□□□ 1.3
RER1-206ENST00000462129 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
RER1-206ENST00000462129 RTKN2Q8IZC4 609 aa23.2■■□□□ 1.3
RER1-206ENST00000462129 WBP1LQ9NX94 342 aa23.2■■□□□ 1.3
RER1-206ENST00000462129 KLRG2A4D1S0 409 aaPredicted RBP23.19■■□□□ 1.3
RER1-206ENST00000462129 IARSP41252 1262 aaKnown RBP23.19■■□□□ 1.3
RER1-206ENST00000462129 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
RER1-206ENST00000462129 TSR2Q969E8 191 aaKnown RBP23.19■■□□□ 1.3
RER1-206ENST00000462129 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
RER1-206ENST00000462129 FANCIQ9NVI1 1328 aa23.18■■□□□ 1.3
RER1-206ENST00000462129 PNMA8AQ86V59 439 aaPredicted RBP23.18■■□□□ 1.3
RER1-206ENST00000462129 CNTROBQ8N137 903 aa23.18■■□□□ 1.3
RER1-206ENST00000462129 SYNE4Q8N205 404 aa23.18■■□□□ 1.3
RER1-206ENST00000462129 RASSF10A6NK89 507 aa23.17■■□□□ 1.3
RER1-206ENST00000462129 FZD9O00144 591 aa23.16■■□□□ 1.3
RER1-206ENST00000462129 DEFB115Q30KQ5 88 aa23.16■■□□□ 1.3
RER1-206ENST00000462129 ABT1Q9ULW3 272 aaKnown RBP23.16■■□□□ 1.3
RER1-206ENST00000462129 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
RER1-206ENST00000462129 HSPA8P11142 646 aaKnown RBP23.15■■□□□ 1.3
RER1-206ENST00000462129 GTF2E1P29083 439 aaPredicted RBP23.15■■□□□ 1.3
RER1-206ENST00000462129 ALDH1B1P30837 517 aa23.15■■□□□ 1.3
RER1-206ENST00000462129 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
RER1-206ENST00000462129 GPC2Q8N158 579 aa23.15■■□□□ 1.3
RER1-206ENST00000462129 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
RER1-206ENST00000462129 HOXB7P09629 217 aa23.14■■□□□ 1.29
RER1-206ENST00000462129 SLFN5Q08AF3 891 aa23.14■■□□□ 1.29
RER1-206ENST00000462129 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
RER1-206ENST00000462129 RGL2O15211 777 aa23.13■■□□□ 1.29
RER1-206ENST00000462129 HLFQ16534 295 aa23.13■■□□□ 1.29
RER1-206ENST00000462129 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
RER1-206ENST00000462129 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
RER1-206ENST00000462129 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
RER1-206ENST00000462129 MAP2K1Q02750 393 aaPredicted RBP23.12■■□□□ 1.29
RER1-206ENST00000462129 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
RER1-206ENST00000462129 ABCC12Q96J65 1359 aa23.12■■□□□ 1.29
RER1-206ENST00000462129 SNED1Q8TER0 1413 aa23.11■■□□□ 1.29
RER1-206ENST00000462129 EIF6P56537 245 aaKnown RBP23.11■■□□□ 1.29
RER1-206ENST00000462129 CDCA7LQ96GN5 454 aa23.11■■□□□ 1.29
RER1-206ENST00000462129 PSMD1Q99460 953 aa23.11■■□□□ 1.29
RER1-206ENST00000462129 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
RER1-206ENST00000462129 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
RER1-206ENST00000462129 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
RER1-206ENST00000462129 LMOD1P29536 600 aaPredicted RBP23.1■■□□□ 1.29
RER1-206ENST00000462129 TWISTNBQ3B726 338 aaPredicted RBP23.1■■□□□ 1.29
RER1-206ENST00000462129 ABHD8Q96I13 439 aa23.1■■□□□ 1.29
RER1-206ENST00000462129 DDX21Q9NR30 783 aaKnown RBP eCLIP23.1■■□□□ 1.29
RER1-206ENST00000462129 COL4A5P29400 1685 aa23.09■■□□□ 1.29
RER1-206ENST00000462129 EXOSC9Q06265 439 aaKnown RBP23.09■■□□□ 1.29
RER1-206ENST00000462129 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
RER1-206ENST00000462129 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
RER1-206ENST00000462129 PAXIP1Q6ZW49 1069 aaPredicted RBP23.09■■□□□ 1.29
RER1-206ENST00000462129 NUTM1Q86Y26 1132 aa23.09■■□□□ 1.29
RER1-206ENST00000462129 LTBP1Q14766 1721 aa23.08■■□□□ 1.29
RER1-206ENST00000462129 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
RER1-206ENST00000462129 CRY2Q49AN0 593 aa23.07■■□□□ 1.28
RER1-206ENST00000462129 C8orf58Q8NAV2 365 aa23.07■■□□□ 1.28
RER1-206ENST00000462129 FMR1Q06787 632 aaKnown RBP eCLIP23.06■■□□□ 1.28
RER1-206ENST00000462129 GRM1Q13255 1194 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 FAM161AQ3B820 660 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 CCDC30Q5VVM6 783 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 CC2D2BQ6DHV5 1058 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 LARGE2Q8N3Y3 721 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
RER1-206ENST00000462129 STK31Q9BXU1 1019 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 THSD7BQ9C0I4 1608 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 ERBB4Q15303 1308 aa23.06■■□□□ 1.28
RER1-206ENST00000462129 SCNN1DP51172 638 aa23.05■■□□□ 1.28
RER1-206ENST00000462129 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
RER1-206ENST00000462129 CAPNS2Q96L46 248 aa23.05■■□□□ 1.28
RER1-206ENST00000462129 EPS15P42566 896 aa23.04■■□□□ 1.28
RER1-206ENST00000462129 CT47B1P0C2W7 299 aaPredicted RBP23.03■■□□□ 1.28
RER1-206ENST00000462129 ECE1P42892 770 aa23.03■■□□□ 1.28
RER1-206ENST00000462129 CYP4F22Q6NT55 531 aa23.03■■□□□ 1.28
RER1-206ENST00000462129 SLC51AQ86UW1 340 aa23.03■■□□□ 1.28
RER1-206ENST00000462129 TRMT2AQ8IZ69 625 aaKnown RBP23.03■■□□□ 1.28
RER1-206ENST00000462129 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms