RNA–Protein interactions for RNA: ENST00000461703.6

TNFRSF25-209, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-209ENST00000461703 DUSP27Q5VZP5 1158 aa29.62■■■□□ 2.33
TNFRSF25-209ENST00000461703 ZNF428Q96B54 188 aa29.62■■■□□ 2.33
TNFRSF25-209ENST00000461703 TAF1P21675 1872 aa29.61■■■□□ 2.33
TNFRSF25-209ENST00000461703 SOGA3Q5TF21 947 aa29.61■■■□□ 2.33
TNFRSF25-209ENST00000461703 DDX60Q8IY21 1712 aaKnown RBP29.61■■■□□ 2.33
TNFRSF25-209ENST00000461703 PARP10Q53GL7 1025 aa29.6■■■□□ 2.33
TNFRSF25-209ENST00000461703 RBM46Q8TBY0 533 aaKnown RBP29.6■■■□□ 2.33
TNFRSF25-209ENST00000461703 HOXB7P09629 217 aa29.59■■■□□ 2.33
TNFRSF25-209ENST00000461703 PPP1R42Q7Z4L9 355 aa29.59■■■□□ 2.33
TNFRSF25-209ENST00000461703 C16orf71Q8IYS4 520 aaPredicted RBP29.59■■■□□ 2.33
TNFRSF25-209ENST00000461703 IFT57Q9NWB7 429 aa29.59■■■□□ 2.33
TNFRSF25-209ENST00000461703 POTECB2RU33 542 aa29.58■■■□□ 2.33
TNFRSF25-209ENST00000461703 ALDH1B1P30837 517 aa29.58■■■□□ 2.33
TNFRSF25-209ENST00000461703 SYNE4Q8N205 404 aa29.58■■■□□ 2.33
TNFRSF25-209ENST00000461703 ZNF277Q9NRM2 450 aaPredicted RBP29.58■■■□□ 2.33
TNFRSF25-209ENST00000461703 FKBP4Q02790 459 aaKnown RBP eCLIP29.57■■■□□ 2.32
TNFRSF25-209ENST00000461703 NLRP10Q86W26 655 aa29.57■■■□□ 2.32
TNFRSF25-209ENST00000461703 RPGRQ92834 1020 aaKnown RBP29.57■■■□□ 2.32
TNFRSF25-209ENST00000461703 UTP14AQ9BVJ6 771 aaKnown RBP29.57■■■□□ 2.32
TNFRSF25-209ENST00000461703 ELL2O00472 640 aaPredicted RBP29.56■■■□□ 2.32
TNFRSF25-209ENST00000461703 HOXA10P31260 410 aaPredicted RBP29.56■■■□□ 2.32
TNFRSF25-209ENST00000461703 COL4A5P29400 1685 aa29.56■■■□□ 2.32
TNFRSF25-209ENST00000461703 GNAI1P63096 354 aa29.55■■■□□ 2.32
TNFRSF25-209ENST00000461703 TCIRG1Q13488 830 aa29.55■■■□□ 2.32
TNFRSF25-209ENST00000461703 DBF4Q9UBU7 674 aaPredicted RBP29.55■■■□□ 2.32
TNFRSF25-209ENST00000461703 DDNO94850 711 aaPredicted RBP29.53■■■□□ 2.32
TNFRSF25-209ENST00000461703 VEGFAP15692 232 aaPredicted RBP29.53■■■□□ 2.32
TNFRSF25-209ENST00000461703 HSP90AB3PQ58FF7 597 aa29.53■■■□□ 2.32
TNFRSF25-209ENST00000461703 C8orf58Q8NAV2 365 aa29.53■■■□□ 2.32
TNFRSF25-209ENST00000461703 TCERG1O14776 1098 aaKnown RBP29.52■■■□□ 2.32
TNFRSF25-209ENST00000461703 HCLS1P14317 486 aaPredicted RBP29.52■■■□□ 2.32
TNFRSF25-209ENST00000461703 SLC10A5Q5PT55 438 aa29.52■■■□□ 2.32
TNFRSF25-209ENST00000461703 PLBD2Q8NHP8 589 aa29.52■■■□□ 2.32
TNFRSF25-209ENST00000461703 MRS2Q9HD23 443 aa29.52■■■□□ 2.32
TNFRSF25-209ENST00000461703 DPY19L2Q6NUT2 758 aa29.51■■■□□ 2.31
TNFRSF25-209ENST00000461703 RTKN2Q8IZC4 609 aa29.51■■■□□ 2.31
TNFRSF25-209ENST00000461703 CRAMP1Q96RY5 1269 aa29.51■■■□□ 2.31
TNFRSF25-209ENST00000461703 ZNF541Q9H0D2 1346 aa29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 CALD1Q05682 793 aaKnown RBP29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 ANKRD13DQ6ZTN6 518 aa29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 RBM17Q96I25 401 aaKnown RBP29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 NLRP3Q96P20 1036 aa29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 PHAXQ9H814 394 aaKnown RBP29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 COL4A1P02462 1669 aa29.5■■■□□ 2.31
TNFRSF25-209ENST00000461703 ANP32CO43423 234 aa29.49■■■□□ 2.31
TNFRSF25-209ENST00000461703 HTRA3P83110 453 aa29.49■■■□□ 2.31
TNFRSF25-209ENST00000461703 TSR2Q969E8 191 aaKnown RBP29.49■■■□□ 2.31
TNFRSF25-209ENST00000461703 HYPKQ9NX55 129 aa29.49■■■□□ 2.31
TNFRSF25-209ENST00000461703 TRMT112Q9UI30 125 aaKnown RBP29.49■■■□□ 2.31
TNFRSF25-209ENST00000461703 ABCC4O15439 1325 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 ATP5J2-PTCD1G3V325 749 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 PPEF1O14829 653 aaPredicted RBP29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 IARSP41252 1262 aaKnown RBP29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 APLP1P51693 650 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 FSTL1Q12841 308 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 TSPYL6Q8N831 410 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 ISCA1Q9BUE6 129 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 SCN4AP35499 1836 aa29.48■■■□□ 2.31
TNFRSF25-209ENST00000461703 RNF123Q5XPI4 1314 aa29.47■■■□□ 2.31
TNFRSF25-209ENST00000461703 SH3TC1Q8TE82 1336 aa29.46■■■□□ 2.31
TNFRSF25-209ENST00000461703 WWC1Q8IX03 1113 aa29.45■■■□□ 2.31
TNFRSF25-209ENST00000461703 SMC1BQ8NDV3 1235 aa29.45■■■□□ 2.31
TNFRSF25-209ENST00000461703 PSMD1Q99460 953 aa29.45■■■□□ 2.31
TNFRSF25-209ENST00000461703 LRRC37AA6NMS7 1700 aa29.43■■■□□ 2.3
TNFRSF25-209ENST00000461703 POTEIP0CG38 1075 aa29.43■■■□□ 2.3
TNFRSF25-209ENST00000461703 POTEJP0CG39 1038 aa29.43■■■□□ 2.3
TNFRSF25-209ENST00000461703 CCDC27Q2M243 656 aa29.43■■■□□ 2.3
TNFRSF25-209ENST00000461703 FAM89AQ96GI7 184 aa29.43■■■□□ 2.3
TNFRSF25-209ENST00000461703 RTL5Q5HYW3 569 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF25-209ENST00000461703 CC2D2BQ6DHV5 1058 aa29.42■■■□□ 2.3
TNFRSF25-209ENST00000461703 DNAJC5GQ8N7S2 189 aa29.41■■■□□ 2.3
TNFRSF25-209ENST00000461703 LTBP1Q14766 1721 aa29.4■■■□□ 2.3
TNFRSF25-209ENST00000461703 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF25-209ENST00000461703 ATP6V0A2Q9Y487 856 aa29.4■■■□□ 2.3
TNFRSF25-209ENST00000461703 FZD9O00144 591 aa29.39■■■□□ 2.3
TNFRSF25-209ENST00000461703 RIC3Q7Z5B4 369 aa29.39■■■□□ 2.3
TNFRSF25-209ENST00000461703 L3MBTL3Q96JM7 780 aaPredicted RBP29.39■■■□□ 2.3
TNFRSF25-209ENST00000461703 DUOX1Q9NRD9 1551 aa29.39■■■□□ 2.29
TNFRSF25-209ENST00000461703 GOLGA2Q08379 1002 aa29.38■■■□□ 2.29
TNFRSF25-209ENST00000461703 ADAMTSL1Q8N6G6 1762 aa29.38■■■□□ 2.29
TNFRSF25-209ENST00000461703 CCDC30Q5VVM6 783 aa29.36■■■□□ 2.29
TNFRSF25-209ENST00000461703 MYD88Q99836 296 aa29.36■■■□□ 2.29
TNFRSF25-209ENST00000461703 TRIM28Q13263 835 aaKnown RBP29.35■■■□□ 2.29
TNFRSF25-209ENST00000461703 GRAPQ13588 217 aa29.35■■■□□ 2.29
TNFRSF25-209ENST00000461703 DDX46Q7L014 1031 aaKnown RBP29.35■■■□□ 2.29
TNFRSF25-209ENST00000461703 GRAPLQ8TC17 118 aaPredicted RBP29.35■■■□□ 2.29
TNFRSF25-209ENST00000461703 LARGE2Q8N3Y3 721 aa29.34■■■□□ 2.29
TNFRSF25-209ENST00000461703 JDP2Q8WYK2 163 aa29.34■■■□□ 2.29
TNFRSF25-209ENST00000461703 TAF1DQ9H5J8 278 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF25-209ENST00000461703 AOC3Q16853 763 aa29.33■■■□□ 2.29
TNFRSF25-209ENST00000461703 JARID2Q92833 1246 aaPredicted RBP29.33■■■□□ 2.29
TNFRSF25-209ENST00000461703 IL16Q14005 1332 aa29.33■■■□□ 2.29
TNFRSF25-209ENST00000461703 FANCIQ9NVI1 1328 aa29.32■■■□□ 2.28
TNFRSF25-209ENST00000461703 BBOX1O75936 387 aa29.32■■■□□ 2.28
TNFRSF25-209ENST00000461703 TWISTNBQ3B726 338 aaPredicted RBP29.32■■■□□ 2.28
TNFRSF25-209ENST00000461703 GRIPAP1Q4V328 841 aa29.32■■■□□ 2.28
TNFRSF25-209ENST00000461703 SP8Q8IXZ3 490 aa29.32■■■□□ 2.28
TNFRSF25-209ENST00000461703 IRS4O14654 1257 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF25-209ENST00000461703 PPIP5K2O43314 1243 aa29.31■■■□□ 2.28
TNFRSF25-209ENST00000461703 SF3B3Q15393 1217 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms