RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 SWI5Q1ZZU3 235 aa8.92□□□□□ -0.98
UBA3-204ENST00000461522 TNFRSF25Q93038 417 aa8.92□□□□□ -0.98
UBA3-204ENST00000461522 QTRT2Q9H974 415 aaKnown RBP8.92□□□□□ -0.98
UBA3-204ENST00000461522 DMGDHQ9UI17 866 aaKnown RBP8.92□□□□□ -0.98
UBA3-204ENST00000461522 GNB5O14775 395 aa8.91□□□□□ -0.98
UBA3-204ENST00000461522 COL8A1P27658 744 aa8.91□□□□□ -0.98
UBA3-204ENST00000461522 PIK3R2O00459 728 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 ATG7O95352 703 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 IGHA1P01876 353 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 ITGB2P05107 769 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 FAM69CQ0P6D2 419 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 GPAT2Q6NUI2 795 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 RAB44Q7Z6P3 723 aaPredicted RBP8.9□□□□□ -0.98
UBA3-204ENST00000461522 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
UBA3-204ENST00000461522 STK32AQ8WU08 396 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 MYO19Q96H55 970 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 SUV39H2Q9H5I1 410 aa8.9□□□□□ -0.98
UBA3-204ENST00000461522 KLK14Q9P0G3 267 aa8.89□□□□□ -0.99
UBA3-204ENST00000461522 ALAS2P22557 587 aa8.88□□□□□ -0.99
UBA3-204ENST00000461522 FKBP5Q13451 457 aaPredicted RBP8.88□□□□□ -0.99
UBA3-204ENST00000461522 DGKZQ13574 1117 aa8.88□□□□□ -0.99
UBA3-204ENST00000461522 OCLNQ16625 522 aa8.88□□□□□ -0.99
UBA3-204ENST00000461522 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
UBA3-204ENST00000461522 CCDC97Q96F63 343 aaPredicted RBP8.88□□□□□ -0.99
UBA3-204ENST00000461522 SERPINA10Q9UK55 444 aa8.88□□□□□ -0.99
UBA3-204ENST00000461522 KRBA1A5PL33 1030 aa8.87□□□□□ -0.99
UBA3-204ENST00000461522 GRNP28799 593 aaKnown RBP8.87□□□□□ -0.99
UBA3-204ENST00000461522 PRIMPOLQ96LW4 560 aa8.87□□□□□ -0.99
UBA3-204ENST00000461522 EFCC1Q9HA90 598 aa8.87□□□□□ -0.99
UBA3-204ENST00000461522 PRMT3O60678 531 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 INPP5BP32019 993 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 ADH7P40394 386 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 C11orf91Q3C1V1 193 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 BHMTQ93088 406 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 PBXIP1Q96AQ6 731 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 GSX2Q9BZM3 304 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.99
UBA3-204ENST00000461522 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
UBA3-204ENST00000461522 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
UBA3-204ENST00000461522 IDH3AP50213 366 aa8.85□□□□□ -0.99
UBA3-204ENST00000461522 TMEM164Q5U3C3 297 aa8.85□□□□□ -0.99
UBA3-204ENST00000461522 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
UBA3-204ENST00000461522 NOP53Q9NZM5 478 aaKnown RBP8.85□□□□□ -0.99
UBA3-204ENST00000461522 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
UBA3-204ENST00000461522 MICAL2O94851 1124 aa8.83□□□□□ -1
UBA3-204ENST00000461522 EPB42P16452 691 aa8.83□□□□□ -1
UBA3-204ENST00000461522 ARSDP51689 593 aa8.83□□□□□ -1
UBA3-204ENST00000461522 CCINQ13939 588 aa8.83□□□□□ -1
UBA3-204ENST00000461522 COL26A1Q96A83 441 aa8.83□□□□□ -1
UBA3-204ENST00000461522 SPOCK3Q9BQ16 436 aa8.83□□□□□ -1
UBA3-204ENST00000461522 PRDM6Q9NQX0 595 aa8.83□□□□□ -1
UBA3-204ENST00000461522 M0R082 166 aa8.82□□□□□ -1
UBA3-204ENST00000461522 MSTNO14793 375 aa8.82□□□□□ -1
UBA3-204ENST00000461522 ALBP02768 609 aa8.82□□□□□ -1
UBA3-204ENST00000461522 PROCP04070 461 aa8.82□□□□□ -1
UBA3-204ENST00000461522 COL9A3Q14050 684 aaPredicted RBP8.82□□□□□ -1
UBA3-204ENST00000461522 COX20Q5RI15 118 aa8.82□□□□□ -1
UBA3-204ENST00000461522 MICALL1Q8N3F8 863 aa8.82□□□□□ -1
UBA3-204ENST00000461522 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
UBA3-204ENST00000461522 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
UBA3-204ENST00000461522 C11orf16Q9NQ32 467 aa8.82□□□□□ -1
UBA3-204ENST00000461522 CXXC1Q9P0U4 656 aaPredicted RBP8.82□□□□□ -1
UBA3-204ENST00000461522 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.82□□□□□ -1
UBA3-204ENST00000461522 C20orf204Q6ZNR8 217 aa8.81□□□□□ -1
UBA3-204ENST00000461522 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
UBA3-204ENST00000461522 IFT43Q96FT9 208 aa8.81□□□□□ -1
UBA3-204ENST00000461522 PLVAPQ9BX97 442 aa8.81□□□□□ -1
UBA3-204ENST00000461522 UBE2OQ9C0C9 1292 aaKnown RBP8.81□□□□□ -1
UBA3-204ENST00000461522 OPLAHO14841 1288 aa8.8□□□□□ -1
UBA3-204ENST00000461522 NFKB1P19838 968 aa8.8□□□□□ -1
UBA3-204ENST00000461522 PNMA5Q96PV4 448 aa8.8□□□□□ -1
UBA3-204ENST00000461522 SLC6A14Q9UN76 642 aa8.8□□□□□ -1
UBA3-204ENST00000461522 MAP3K6O95382 1288 aa8.79□□□□□ -1
UBA3-204ENST00000461522 C8orf86Q6ZUL3 223 aa8.79□□□□□ -1
UBA3-204ENST00000461522 SAP130Q9H0E3 1048 aa8.79□□□□□ -1
UBA3-204ENST00000461522 DNAJB12Q9NXW2 375 aaKnown RBP8.79□□□□□ -1
UBA3-204ENST00000461522 SLAIN2Q9P270 581 aa8.79□□□□□ -1
UBA3-204ENST00000461522 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
UBA3-204ENST00000461522 C16orf46Q6P387 395 aa8.78□□□□□ -1
UBA3-204ENST00000461522 CAPN12Q6ZSI9 719 aa8.78□□□□□ -1
UBA3-204ENST00000461522 TREML1Q86YW5 311 aa8.78□□□□□ -1
UBA3-204ENST00000461522 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
UBA3-204ENST00000461522 ZFATQ9P243 1243 aa8.78□□□□□ -1
UBA3-204ENST00000461522 NID1P14543 1247 aa8.77□□□□□ -1.01
UBA3-204ENST00000461522 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
UBA3-204ENST00000461522 IGFLR1Q9H665 355 aa8.77□□□□□ -1.01
UBA3-204ENST00000461522 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
UBA3-204ENST00000461522 RTCBQ9Y3I0 505 aaKnown RBP8.77□□□□□ -1.01
UBA3-204ENST00000461522 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 C1QTNF9BB2RNN3 333 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 PTCD1O75127 700 aaKnown RBP8.76□□□□□ -1.01
UBA3-204ENST00000461522 EGFRP00533 1210 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 ETFBKMTQ8IXQ9 262 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 NAGPAQ9UK23 515 aa8.76□□□□□ -1.01
UBA3-204ENST00000461522 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms