RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
SSBP1-202ENST00000461433 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.12
SSBP1-202ENST00000461433 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
SSBP1-202ENST00000461433 ABCC4O15439 1325 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 TPTE2Q6XPS3 522 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 NUTM1Q86Y26 1132 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 CCDC24Q8N4L8 307 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 UTP14AQ9BVJ6 771 aaKnown RBP14.32□□□□□ -0.12
SSBP1-202ENST00000461433 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
SSBP1-202ENST00000461433 KIAA1551Q9HCM1 1747 aa14.31□□□□□ -0.12
SSBP1-202ENST00000461433 GCKRQ14397 625 aa14.31□□□□□ -0.12
SSBP1-202ENST00000461433 ERFEQ4G0M1 354 aa14.31□□□□□ -0.12
SSBP1-202ENST00000461433 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
SSBP1-202ENST00000461433 NYXQ9GZU5 481 aa14.31□□□□□ -0.12
SSBP1-202ENST00000461433 CWC25Q9NXE8 425 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-202ENST00000461433 DDX60Q8IY21 1712 aaKnown RBP14.31□□□□□ -0.12
SSBP1-202ENST00000461433 PLIN1O60240 522 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 SRCIN1Q9C0H9 1055 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
SSBP1-202ENST00000461433 ABCC12Q96J65 1359 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
SSBP1-202ENST00000461433 H7C1W4 665 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 ALDH1L1O75891 902 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 SLC10A5Q5PT55 438 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 ZBTB38Q8NAP3 1195 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-202ENST00000461433 JARID2Q92833 1246 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-202ENST00000461433 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
SSBP1-202ENST00000461433 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
SSBP1-202ENST00000461433 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-202ENST00000461433 RLBP1P12271 317 aa14.29□□□□□ -0.12
SSBP1-202ENST00000461433 CASP7P55210 303 aa14.29□□□□□ -0.12
SSBP1-202ENST00000461433 INTS3Q68E01 1043 aaKnown RBP14.29□□□□□ -0.12
SSBP1-202ENST00000461433 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-202ENST00000461433 CD2APQ9Y5K6 639 aa14.29□□□□□ -0.12
SSBP1-202ENST00000461433 LAMB2P55268 1798 aa14.29□□□□□ -0.12
SSBP1-202ENST00000461433 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
SSBP1-202ENST00000461433 CCT4P50991 539 aaKnown RBP14.28□□□□□ -0.12
SSBP1-202ENST00000461433 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
SSBP1-202ENST00000461433 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
SSBP1-202ENST00000461433 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
SSBP1-202ENST00000461433 COL11A2P13942 1736 aaPredicted RBP14.27□□□□□ -0.12
SSBP1-202ENST00000461433 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.12
SSBP1-202ENST00000461433 ST5P78524 1137 aa14.27□□□□□ -0.12
SSBP1-202ENST00000461433 DZIP1LQ8IYY4 767 aaKnown RBP14.27□□□□□ -0.12
SSBP1-202ENST00000461433 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.12
SSBP1-202ENST00000461433 USP44Q9H0E7 712 aa14.27□□□□□ -0.12
SSBP1-202ENST00000461433 PPP1R1BQ9UD71 204 aaPredicted RBP14.27□□□□□ -0.12
SSBP1-202ENST00000461433 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-202ENST00000461433 NPHP1O15259 732 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-202ENST00000461433 C3orf67Q6ZVT6 689 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 UTYO14607 1347 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 GRM8O00222 908 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 IRS4O14654 1257 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-202ENST00000461433 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-202ENST00000461433 KCNA3P22001 575 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
SSBP1-202ENST00000461433 BRCA1P38398 1863 aaKnown RBP14.25□□□□□ -0.13
SSBP1-202ENST00000461433 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
SSBP1-202ENST00000461433 TGFB2P61812 414 aa14.25□□□□□ -0.13
SSBP1-202ENST00000461433 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
SSBP1-202ENST00000461433 MYH3P11055 1940 aa14.25□□□□□ -0.13
SSBP1-202ENST00000461433 CHRNA5P30532 468 aa14.24□□□□□ -0.13
SSBP1-202ENST00000461433 PDE6BP35913 854 aa14.24□□□□□ -0.13
SSBP1-202ENST00000461433 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
SSBP1-202ENST00000461433 C9orf78Q9NZ63 289 aaPredicted RBP14.24□□□□□ -0.13
SSBP1-202ENST00000461433 A0A0G2JLW4 131 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 SRGNP10124 158 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 DPEP1P16444 411 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 PDE3AQ14432 1141 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
SSBP1-202ENST00000461433 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
SSBP1-202ENST00000461433 KAZALD1Q96I82 304 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 PDE8AO60658 829 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 C2CD5Q86YS7 1000 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 NLRP3Q96P20 1036 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 MEIS3Q99687 375 aa14.23□□□□□ -0.13
SSBP1-202ENST00000461433 TAF1P21675 1872 aa14.22□□□□□ -0.13
SSBP1-202ENST00000461433 MS4A1P11836 297 aa14.22□□□□□ -0.13
SSBP1-202ENST00000461433 FOXO4P98177 505 aa14.22□□□□□ -0.13
SSBP1-202ENST00000461433 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
SSBP1-202ENST00000461433 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
SSBP1-202ENST00000461433 EPHA10Q5JZY3 1008 aa14.22□□□□□ -0.13
SSBP1-202ENST00000461433 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
SSBP1-202ENST00000461433 H0YIN7 160 aa14.21□□□□□ -0.13
SSBP1-202ENST00000461433 ZBTB7BO15156 539 aaPredicted RBP14.21□□□□□ -0.13
SSBP1-202ENST00000461433 SUCLG2Q96I99 432 aa14.21□□□□□ -0.13
SSBP1-202ENST00000461433 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
SSBP1-202ENST00000461433 COL4A1P02462 1669 aa14.21□□□□□ -0.14
SSBP1-202ENST00000461433 CSF1RP07333 972 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms