RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 WASHC4Q2M389 1173 aa9.65□□□□□ -0.86
NUP50-212ENST00000461194 BPHLQ86WA6 291 aaPredicted RBP9.65□□□□□ -0.86
NUP50-212ENST00000461194 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
NUP50-212ENST00000461194 CARD14Q9BXL6 1004 aa9.65□□□□□ -0.86
NUP50-212ENST00000461194 SLC12A5Q9H2X9 1139 aa9.65□□□□□ -0.86
NUP50-212ENST00000461194 BTG4Q9NY30 223 aa9.65□□□□□ -0.86
NUP50-212ENST00000461194 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.87
NUP50-212ENST00000461194 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
NUP50-212ENST00000461194 TTC21AQ8NDW8 1320 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
NUP50-212ENST00000461194 TMF1P82094 1093 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 NR1H3Q13133 447 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
NUP50-212ENST00000461194 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 ABCA3Q99758 1704 aa9.64□□□□□ -0.87
NUP50-212ENST00000461194 CPDO75976 1380 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 NINLQ9Y2I6 1382 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 CHRNA2Q15822 529 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 RC3H1Q5TC82 1133 aaKnown RBP9.63□□□□□ -0.87
NUP50-212ENST00000461194 ZNF598Q86UK7 904 aaKnown RBP9.63□□□□□ -0.87
NUP50-212ENST00000461194 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 TERF2IPQ9NYB0 399 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
NUP50-212ENST00000461194 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
NUP50-212ENST00000461194 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
NUP50-212ENST00000461194 CRYBG1Q9Y4K1 1723 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 FOXC1Q12948 553 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 ZNF697Q5TEC3 545 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 ADAM32Q8TC27 787 aa9.62□□□□□ -0.87
NUP50-212ENST00000461194 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
NUP50-212ENST00000461194 COL14A1Q05707 1796 aaKnown RBP9.61□□□□□ -0.87
NUP50-212ENST00000461194 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUP50-212ENST00000461194 KCNH5Q8NCM2 988 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 GLI3P10071 1580 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 NWD2Q9ULI1 1742 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 USP31Q70CQ4 1352 aa9.61□□□□□ -0.87
NUP50-212ENST00000461194 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
NUP50-212ENST00000461194 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 NRKQ7Z2Y5 1582 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 EDC4Q6P2E9 1401 aaKnown RBP9.6□□□□□ -0.87
NUP50-212ENST00000461194 SH3RF1Q7Z6J0 888 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 SLIT3O75094 1523 aa9.6□□□□□ -0.87
NUP50-212ENST00000461194 VARSP26640 1264 aaKnown RBP9.59□□□□□ -0.87
NUP50-212ENST00000461194 EVA1CP58658 441 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 EIF4G2P78344 907 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP50-212ENST00000461194 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 NME9Q86XW9 330 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 PCDHB9Q9Y5E1 797 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 AATKQ6ZMQ8 1374 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 ANKRD36BQ8N2N9 1353 aa9.59□□□□□ -0.87
NUP50-212ENST00000461194 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 PIK3C2AO00443 1686 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 WNT7AO00755 349 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 HDGFL1Q5TGJ6 251 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 DZIP3Q86Y13 1208 aaKnown RBP9.58□□□□□ -0.88
NUP50-212ENST00000461194 FAM174AQ8TBP5 190 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 MRGPRX2Q96LB1 330 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 NRAPQ86VF7 1730 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 CAMTA1Q9Y6Y1 1673 aa9.58□□□□□ -0.88
NUP50-212ENST00000461194 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
NUP50-212ENST00000461194 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
NUP50-212ENST00000461194 SEMA3FQ13275 785 aa9.57□□□□□ -0.88
NUP50-212ENST00000461194 ARID5BQ14865 1188 aa9.57□□□□□ -0.88
NUP50-212ENST00000461194 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
NUP50-212ENST00000461194 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
NUP50-212ENST00000461194 RGS20O76081 388 aa9.56□□□□□ -0.88
NUP50-212ENST00000461194 MYT1Q01538 1121 aa9.56□□□□□ -0.88
NUP50-212ENST00000461194 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
NUP50-212ENST00000461194 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
NUP50-212ENST00000461194 LMO7Q8WWI1 1683 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 COL5A2P05997 1499 aaPredicted RBP9.55□□□□□ -0.88
NUP50-212ENST00000461194 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 USP35Q9P2H5 1018 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 THRAP3Q9Y2W1 955 aaKnown RBP9.55□□□□□ -0.88
NUP50-212ENST00000461194 NFAT5O94916 1531 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 OVOS2A0A0J9YW53 1432 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 OVOS2Q6IE36 1432 aa9.55□□□□□ -0.88
NUP50-212ENST00000461194 TNFRSF10AO00220 468 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 FYB1O15117 783 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 COG3Q96JB2 828 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 CALR3Q96L12 384 aaKnown RBP9.54□□□□□ -0.88
NUP50-212ENST00000461194 ALG2Q9H553 416 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
NUP50-212ENST00000461194 SIAH2O43255 324 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 286.8 ms