RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 FOXN1O15353 648 aa24.01■■□□□ 1.43
COL9A2-205ENST00000461118 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
COL9A2-205ENST00000461118 FAM177BA6PVY3 158 aa24■■□□□ 1.43
COL9A2-205ENST00000461118 CRY2Q49AN0 593 aa24■■□□□ 1.43
COL9A2-205ENST00000461118 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
COL9A2-205ENST00000461118 CFAP44Q96MT7 982 aa24■■□□□ 1.43
COL9A2-205ENST00000461118 ERBB4Q15303 1308 aa24■■□□□ 1.43
COL9A2-205ENST00000461118 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
COL9A2-205ENST00000461118 VEGFBP49765 207 aa23.98■■□□□ 1.43
COL9A2-205ENST00000461118 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
COL9A2-205ENST00000461118 HACL1Q9UJ83 578 aa23.98■■□□□ 1.43
COL9A2-205ENST00000461118 TMEM88BA6NKF7 163 aa23.97■■□□□ 1.43
COL9A2-205ENST00000461118 ZNF853P0CG23 659 aa23.97■■□□□ 1.43
COL9A2-205ENST00000461118 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
COL9A2-205ENST00000461118 EPHX2P34913 555 aa23.97■■□□□ 1.43
COL9A2-205ENST00000461118 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
COL9A2-205ENST00000461118 RNF123Q5XPI4 1314 aa23.97■■□□□ 1.43
COL9A2-205ENST00000461118 LAS1LQ9Y4W2 734 aaKnown RBP23.97■■□□□ 1.43
COL9A2-205ENST00000461118 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
COL9A2-205ENST00000461118 EAPPQ56P03 285 aaPredicted RBP23.96■■□□□ 1.43
COL9A2-205ENST00000461118 RIC1Q4ADV7 1423 aa23.95■■□□□ 1.42
COL9A2-205ENST00000461118 SLC51AQ86UW1 340 aa23.95■■□□□ 1.42
COL9A2-205ENST00000461118 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
COL9A2-205ENST00000461118 PSMD1Q99460 953 aa23.95■■□□□ 1.42
COL9A2-205ENST00000461118 TRPM7Q96QT4 1865 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 ERVV-1B6SEH8 477 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 PDIA6Q15084 440 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 CCDC27Q2M243 656 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 GPC2Q8N158 579 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 PRDM10Q9NQV6 1147 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 IFT57Q9NWB7 429 aa23.94■■□□□ 1.42
COL9A2-205ENST00000461118 UBN2Q6ZU65 1347 aa23.93■■□□□ 1.42
COL9A2-205ENST00000461118 THSD7BQ9C0I4 1608 aa23.93■■□□□ 1.42
COL9A2-205ENST00000461118 GNAI1P63096 354 aa23.93■■□□□ 1.42
COL9A2-205ENST00000461118 MAP1SQ66K74 1059 aaPredicted RBP23.93■■□□□ 1.42
COL9A2-205ENST00000461118 MAP3K15Q6ZN16 1313 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 HOXB7P09629 217 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 MYL6BP14649 208 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 EIF2S2P20042 333 aaKnown RBP23.92■■□□□ 1.42
COL9A2-205ENST00000461118 HOXA10P31260 410 aaPredicted RBP23.92■■□□□ 1.42
COL9A2-205ENST00000461118 TTLL7Q6ZT98 887 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
COL9A2-205ENST00000461118 CNTROBQ8N137 903 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 MBIPQ9NS73 344 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 WBP1LQ9NX94 342 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 LAMB2P55268 1798 aa23.92■■□□□ 1.42
COL9A2-205ENST00000461118 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
COL9A2-205ENST00000461118 RASSF10A6NK89 507 aa23.91■■□□□ 1.42
COL9A2-205ENST00000461118 KRT24Q2M2I5 525 aa23.91■■□□□ 1.42
COL9A2-205ENST00000461118 NGEFQ8N5V2 710 aa23.91■■□□□ 1.42
COL9A2-205ENST00000461118 CLEC11AQ9Y240 323 aa23.91■■□□□ 1.42
COL9A2-205ENST00000461118 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
COL9A2-205ENST00000461118 NYXQ9GZU5 481 aa23.9■■□□□ 1.42
COL9A2-205ENST00000461118 CTCFP49711 727 aaPredicted RBP23.88■■□□□ 1.41
COL9A2-205ENST00000461118 SUSD4Q5VX71 490 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 CC2D2BQ6DHV5 1058 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 ZNF34Q8IZ26 560 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 ANKRD36CQ5JPF3 1778 aa23.88■■□□□ 1.41
COL9A2-205ENST00000461118 SCNN1DP51172 638 aa23.87■■□□□ 1.41
COL9A2-205ENST00000461118 C3orf67Q6ZVT6 689 aa23.87■■□□□ 1.41
COL9A2-205ENST00000461118 DDX21Q9NR30 783 aaKnown RBP eCLIP23.87■■□□□ 1.41
COL9A2-205ENST00000461118 NTSR2O95665 410 aa23.86■■□□□ 1.41
COL9A2-205ENST00000461118 GPTP24298 496 aa23.86■■□□□ 1.41
COL9A2-205ENST00000461118 FMR1Q06787 632 aaKnown RBP eCLIP23.86■■□□□ 1.41
COL9A2-205ENST00000461118 PROSER3Q2NL68 480 aa23.86■■□□□ 1.41
COL9A2-205ENST00000461118 DEFB115Q30KQ5 88 aa23.86■■□□□ 1.41
COL9A2-205ENST00000461118 JDP2Q8WYK2 163 aa23.86■■□□□ 1.41
COL9A2-205ENST00000461118 LBX1P52954 281 aa23.85■■□□□ 1.41
COL9A2-205ENST00000461118 DUSP27Q5VZP5 1158 aa23.85■■□□□ 1.41
COL9A2-205ENST00000461118 GIGYF2Q6Y7W6 1299 aaKnown RBP23.85■■□□□ 1.41
COL9A2-205ENST00000461118 ZBTB3Q9H5J0 574 aa23.85■■□□□ 1.41
COL9A2-205ENST00000461118 TAF1P21675 1872 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 EPS15P42566 896 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 HDGFL1Q5TGJ6 251 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 NECTIN2Q92692 538 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 CRAMP1Q96RY5 1269 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 GJA3Q9Y6H8 435 aa23.84■■□□□ 1.41
COL9A2-205ENST00000461118 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
COL9A2-205ENST00000461118 ANXA1P04083 346 aa23.83■■□□□ 1.41
COL9A2-205ENST00000461118 EIF6P56537 245 aaKnown RBP23.83■■□□□ 1.41
COL9A2-205ENST00000461118 FAM9BQ8IZU0 186 aa23.83■■□□□ 1.41
COL9A2-205ENST00000461118 RPGRQ92834 1020 aaKnown RBP23.83■■□□□ 1.41
COL9A2-205ENST00000461118 AIDAQ96BJ3 306 aa23.83■■□□□ 1.41
COL9A2-205ENST00000461118 IL16Q14005 1332 aa23.83■■□□□ 1.4
COL9A2-205ENST00000461118 HSPA8P11142 646 aaKnown RBP23.82■■□□□ 1.4
COL9A2-205ENST00000461118 COPS6Q7L5N1 327 aa23.82■■□□□ 1.4
COL9A2-205ENST00000461118 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
COL9A2-205ENST00000461118 PPEF1O14829 653 aaPredicted RBP23.81■■□□□ 1.4
COL9A2-205ENST00000461118 GRIPAP1Q4V328 841 aa23.81■■□□□ 1.4
COL9A2-205ENST00000461118 LARGE2Q8N3Y3 721 aa23.81■■□□□ 1.4
COL9A2-205ENST00000461118 CHPF2Q9P2E5 772 aa23.81■■□□□ 1.4
COL9A2-205ENST00000461118 CST9Q5W186 159 aa23.8■■□□□ 1.4
COL9A2-205ENST00000461118 XAGE3Q8WTP9 111 aa23.8■■□□□ 1.4
COL9A2-205ENST00000461118 RBM17Q96I25 401 aaKnown RBP23.8■■□□□ 1.4
COL9A2-205ENST00000461118 WDR63Q8IWG1 891 aa23.79■■□□□ 1.4
COL9A2-205ENST00000461118 C8orf58Q8NAV2 365 aa23.79■■□□□ 1.4
COL9A2-205ENST00000461118 CHMP4AQ9BY43 222 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms