RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 FOXO3O43524 673 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 APBA3O96018 575 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 KRT76Q01546 638 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 TRMT44Q8IYL2 757 aaKnown RBP6.92□□□□□ -1.3
CNN3-204ENST00000461018 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
CNN3-204ENST00000461018 TRIM34Q9BYJ4 488 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 DNMT3LQ9UJW3 386 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 DNMT3AQ9Y6K1 912 aaPredicted RBP6.92□□□□□ -1.3
CNN3-204ENST00000461018 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
CNN3-204ENST00000461018 CEP162Q5TB80 1403 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 PXDNQ92626 1479 aa6.92□□□□□ -1.3
CNN3-204ENST00000461018 FAM83GA6ND36 823 aa6.91□□□□□ -1.3
CNN3-204ENST00000461018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.91□□□□□ -1.3
CNN3-204ENST00000461018 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
CNN3-204ENST00000461018 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
CNN3-204ENST00000461018 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
CNN3-204ENST00000461018 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
CNN3-204ENST00000461018 SVOPQ8N4V2 548 aa6.91□□□□□ -1.3
CNN3-204ENST00000461018 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
CNN3-204ENST00000461018 DUOX2Q9NRD8 1548 aa6.91□□□□□ -1.3
CNN3-204ENST00000461018 NUP188Q5SRE5 1749 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 ZBTB7AO95365 584 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 FOXK2Q01167 660 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 ESCO1Q5FWF5 840 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.3
CNN3-204ENST00000461018 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 TSEN34Q9BSV6 310 aaKnown RBP6.9□□□□□ -1.3
CNN3-204ENST00000461018 SYT17Q9BSW7 474 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.3
CNN3-204ENST00000461018 FHDC1Q9C0D6 1143 aaPredicted RBP6.9□□□□□ -1.3
CNN3-204ENST00000461018 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 MAP4K5Q9Y4K4 846 aa6.9□□□□□ -1.3
CNN3-204ENST00000461018 NRKQ7Z2Y5 1582 aa6.9□□□□□ -1.31
CNN3-204ENST00000461018 NRXN3Q9Y4C0 1643 aa6.9□□□□□ -1.31
CNN3-204ENST00000461018 IRS1P35568 1242 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 ZNF385CQ66K41 422 aaPredicted RBP6.89□□□□□ -1.31
CNN3-204ENST00000461018 KANK3Q6NY19 840 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 NANOS1Q8WY41 292 aaKnown RBP6.89□□□□□ -1.31
CNN3-204ENST00000461018 GPSM3Q9Y4H4 160 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 EMILIN1Q9Y6C2 1016 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 KIF15Q9NS87 1388 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 MYOM1P52179 1685 aa6.89□□□□□ -1.31
CNN3-204ENST00000461018 RREB1Q92766 1687 aa6.88□□□□□ -1.31
CNN3-204ENST00000461018 MARSP56192 900 aaKnown RBP6.88□□□□□ -1.31
CNN3-204ENST00000461018 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
CNN3-204ENST00000461018 BANK1Q8NDB2 785 aa6.88□□□□□ -1.31
CNN3-204ENST00000461018 CDV3Q9UKY7 258 aaKnown RBP6.88□□□□□ -1.31
CNN3-204ENST00000461018 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 KANK1Q14678 1352 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 PTSQ03393 145 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 CBLBQ13191 982 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 MTMR14Q8NCE2 650 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 PCDHB9Q9Y5E1 797 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 PLCH1Q4KWH8 1693 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 USP32Q8NFA0 1604 aa6.87□□□□□ -1.31
CNN3-204ENST00000461018 SPATA31A3Q5VYP0 1347 aa6.86□□□□□ -1.31
CNN3-204ENST00000461018 NPHP3Q7Z494 1330 aa6.86□□□□□ -1.31
CNN3-204ENST00000461018 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
CNN3-204ENST00000461018 HSPA6P17066 643 aa6.86□□□□□ -1.31
CNN3-204ENST00000461018 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
CNN3-204ENST00000461018 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
CNN3-204ENST00000461018 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
CNN3-204ENST00000461018 ERBINQ96RT1 1412 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 SLURP2P0DP57 97 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 PRELPP51888 382 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
CNN3-204ENST00000461018 TMPRSS4Q9NRS4 437 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 BTG4Q9NY30 223 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 NDUFB9Q9Y6M9 179 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 ADGRL2O95490 1459 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 CASZ1Q86V15 1759 aa6.85□□□□□ -1.31
CNN3-204ENST00000461018 ABCC5O15440 1437 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 APBB1O00213 710 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 RNFT1Q5M7Z0 435 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 CCDC155Q8N6L0 562 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 DNAJC5GQ8N7S2 189 aa6.84□□□□□ -1.31
CNN3-204ENST00000461018 PTPN23Q9H3S7 1636 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 SPATA31A5Q5VU36 1347 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 SPATA31A7Q8IWB4 1347 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 FIGNL2A6NMB9 653 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 RELBQ01201 579 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 GPR162Q16538 588 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 KRT28Q7Z3Y7 464 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 WHAMMQ8TF30 809 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 AGBL1Q96MI9 1066 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 NWD2Q9ULI1 1742 aa6.83□□□□□ -1.32
CNN3-204ENST00000461018 RPRD2Q5VT52 1461 aaKnown RBP6.83□□□□□ -1.32
CNN3-204ENST00000461018 THSD7AQ9UPZ6 1657 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms