RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 NUTM1Q86Y26 1132 aa15.03■□□□□ -0
LSG1-204ENST00000460584 GPC2Q8N158 579 aa15.03■□□□□ -0
LSG1-204ENST00000460584 CACNA1SQ13698 1873 aa15.02■□□□□ -0
LSG1-204ENST00000460584 PNMA8AQ86V59 439 aaPredicted RBP15.02■□□□□ -0
LSG1-204ENST00000460584 VPS33BQ9H267 617 aa15.02■□□□□ -0
LSG1-204ENST00000460584 TSPYL4Q9UJ04 414 aa15.02■□□□□ -0
LSG1-204ENST00000460584 HACL1Q9UJ83 578 aa15.02■□□□□ -0
LSG1-204ENST00000460584 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 TMPOP42166 694 aaKnown RBP15.01□□□□□ -0.01
LSG1-204ENST00000460584 RIPK4P57078 832 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 ZBTB3Q9H5J0 574 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 PCNTO95613 3336 aa15.01□□□□□ -0.01
LSG1-204ENST00000460584 CNTNAP1P78357 1384 aa15□□□□□ -0.01
LSG1-204ENST00000460584 HSPA1AP0DMV8 641 aaKnown RBP15□□□□□ -0.01
LSG1-204ENST00000460584 HSPA1BP0DMV9 641 aaKnown RBP15□□□□□ -0.01
LSG1-204ENST00000460584 MYL6BP14649 208 aa15□□□□□ -0.01
LSG1-204ENST00000460584 EPHX2P34913 555 aa15□□□□□ -0.01
LSG1-204ENST00000460584 NGEFQ8N5V2 710 aa15□□□□□ -0.01
LSG1-204ENST00000460584 RPGRQ92834 1020 aaKnown RBP15□□□□□ -0.01
LSG1-204ENST00000460584 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
LSG1-204ENST00000460584 CHL1O00533 1208 aa14.99□□□□□ -0.01
LSG1-204ENST00000460584 GPTP24298 496 aa14.99□□□□□ -0.01
LSG1-204ENST00000460584 JDP2Q8WYK2 163 aa14.99□□□□□ -0.01
LSG1-204ENST00000460584 RTFDC1Q9BY42 306 aaPredicted RBP14.99□□□□□ -0.01
LSG1-204ENST00000460584 COL4A5P29400 1685 aa14.99□□□□□ -0.01
LSG1-204ENST00000460584 HSP90AB3PQ58FF7 597 aa14.98□□□□□ -0.01
LSG1-204ENST00000460584 C3orf67Q6ZVT6 689 aa14.98□□□□□ -0.01
LSG1-204ENST00000460584 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
LSG1-204ENST00000460584 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
LSG1-204ENST00000460584 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
LSG1-204ENST00000460584 TMEM88BA6NKF7 163 aa14.97□□□□□ -0.01
LSG1-204ENST00000460584 HOXB7P09629 217 aa14.97□□□□□ -0.01
LSG1-204ENST00000460584 PROSER3Q2NL68 480 aa14.97□□□□□ -0.01
LSG1-204ENST00000460584 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
LSG1-204ENST00000460584 ATP6V0A2Q9Y487 856 aa14.97□□□□□ -0.01
LSG1-204ENST00000460584 RASSF10A6NK89 507 aa14.96□□□□□ -0.01
LSG1-204ENST00000460584 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
LSG1-204ENST00000460584 BBOX1O75936 387 aa14.96□□□□□ -0.01
LSG1-204ENST00000460584 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.01
LSG1-204ENST00000460584 NLRP10Q86W26 655 aa14.96□□□□□ -0.01
LSG1-204ENST00000460584 SCNN1DP51172 638 aa14.95□□□□□ -0.02
LSG1-204ENST00000460584 TCIRG1Q13488 830 aa14.95□□□□□ -0.02
LSG1-204ENST00000460584 CNTROBQ8N137 903 aa14.95□□□□□ -0.02
LSG1-204ENST00000460584 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
LSG1-204ENST00000460584 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
LSG1-204ENST00000460584 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
LSG1-204ENST00000460584 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
LSG1-204ENST00000460584 SP8Q8IXZ3 490 aa14.94□□□□□ -0.02
LSG1-204ENST00000460584 TNS4Q8IZW8 715 aa14.94□□□□□ -0.02
LSG1-204ENST00000460584 LARGE2Q8N3Y3 721 aa14.94□□□□□ -0.02
LSG1-204ENST00000460584 RUNDC1Q96C34 613 aa14.94□□□□□ -0.02
LSG1-204ENST00000460584 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
LSG1-204ENST00000460584 ABCC4O15439 1325 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 LTBP1Q14766 1721 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 EAPPQ56P03 285 aaPredicted RBP14.93□□□□□ -0.02
LSG1-204ENST00000460584 TMC4Q7Z404 712 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 SUPT20HQ8NEM7 779 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 XAGE3Q8WTP9 111 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 PRDM10Q9NQV6 1147 aa14.93□□□□□ -0.02
LSG1-204ENST00000460584 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 ANXA1P04083 346 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 VEGFBP49765 207 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 TRIM28Q13263 835 aaKnown RBP14.92□□□□□ -0.02
LSG1-204ENST00000460584 NIM1KQ8IY84 436 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 SH3TC1Q8TE82 1336 aa14.92□□□□□ -0.02
LSG1-204ENST00000460584 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 LMOD1P29536 600 aaPredicted RBP14.91□□□□□ -0.02
LSG1-204ENST00000460584 EPS15P42566 896 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 KIAA2012Q0VF49 1180 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 MAP1SQ66K74 1059 aaPredicted RBP14.91□□□□□ -0.02
LSG1-204ENST00000460584 SLC51AQ86UW1 340 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 CFAP44Q96MT7 982 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 ISCA1Q9BUE6 129 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 TMX4Q9H1E5 349 aaPredicted RBP14.91□□□□□ -0.02
LSG1-204ENST00000460584 PGAP2Q9UHJ9 254 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 ZNRF3Q9ULT6 936 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
LSG1-204ENST00000460584 PPIP5K2O43314 1243 aa14.9□□□□□ -0.02
LSG1-204ENST00000460584 ZNF853P0CG23 659 aa14.9□□□□□ -0.02
LSG1-204ENST00000460584 GRAPQ13588 217 aa14.9□□□□□ -0.02
LSG1-204ENST00000460584 SF3B3Q15393 1217 aaKnown RBP14.9□□□□□ -0.02
LSG1-204ENST00000460584 GRAPLQ8TC17 118 aaPredicted RBP14.9□□□□□ -0.02
LSG1-204ENST00000460584 GPRC5DQ9NZD1 345 aa14.9□□□□□ -0.02
LSG1-204ENST00000460584 DBF4Q9UBU7 674 aaPredicted RBP14.9□□□□□ -0.02
LSG1-204ENST00000460584 FOXN1O15353 648 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 CXCL9Q07325 125 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 AOC3Q16853 763 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 DEFB115Q30KQ5 88 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 ADARB2Q9NS39 739 aaKnown RBP14.89□□□□□ -0.03
LSG1-204ENST00000460584 CHPF2Q9P2E5 772 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 TRMT112Q9UI30 125 aaKnown RBP14.89□□□□□ -0.03
LSG1-204ENST00000460584 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
LSG1-204ENST00000460584 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
LSG1-204ENST00000460584 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
LSG1-204ENST00000460584 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms