RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 NCBP1Q09161 790 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 DHX37Q8IY37 1157 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 ZNF526Q8TF50 670 aaPredicted RBP10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 C1orf115Q9H7X2 142 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 NUP160Q12769 1436 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 CCDC82Q8N4S0 544 aa10.18□□□□□ -0.78
SHROOM4-203ENST00000460112 PCF11O94913 1555 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 HYPKQ9NX55 129 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 ABCF2Q9UG63 623 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 NOL3O60936 208 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 CNGA1P29973 690 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 KIAA0753Q2KHM9 967 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 CCDC77Q9BR77 488 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 IL16Q14005 1332 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 KIF1BO60333 1816 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 TERF1P54274 439 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 BICD1Q96G01 975 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 MTIF2P46199 727 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 CEP128Q6ZU80 1094 aa10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 SETD1BQ9UPS6 1966 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 PAXIP1Q6ZW49 1069 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-203ENST00000460112 ODF2LQ9ULJ1 636 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 RPRD2Q5VT52 1461 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 CNNM3Q8NE01 707 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 STX6O43752 255 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 HSF2BPO75031 334 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 ATP2A2P16615 1042 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 SNX16P57768 344 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 HLTFQ14527 1009 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 MRC2Q9UBG0 1479 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 PAIP2Q9BPZ3 127 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 EXOC1Q9NV70 894 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 ST5P78524 1137 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 JAKMIP2Q96AA8 810 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 SELENOOQ9BVL4 669 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 IMPG2Q9BZV3 1241 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 PTPRCP08575 1304 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 ALDH3A1P30838 453 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 NLRP5P59047 1200 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 RNF187Q5TA31 235 aaPredicted RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 FAM114A2Q9NRY5 505 aa10.16□□□□□ -0.78
SHROOM4-203ENST00000460112 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 SMC6Q96SB8 1091 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 NDC80O14777 642 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 GOLGA8BA8MQT2 603 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 MAP4K4O95819 1239 aaPredicted RBP10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 SH3BGRP55822 239 aaPredicted RBP10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 WDR66Q8TBY9 1149 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 SWAP70Q9UH65 585 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 ZNF213O14771 459 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 HSPA4P34932 840 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 SEPT6Q14141 434 aa10.15□□□□□ -0.78
SHROOM4-203ENST00000460112 GAS8O95995 478 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 CHMP4BP1P59074 171 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 WDR78Q5VTH9 848 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 MAATS1Q7Z4T9 603 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 SOS1Q07889 1333 aaPredicted RBP10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 NCOA1Q15788 1441 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 KIF5AQ12840 1032 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 KAT14Q9H8E8 782 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 HAUS2Q9NVX0 235 aa10.15□□□□□ -0.79
SHROOM4-203ENST00000460112 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 MAP7D1Q3KQU3 841 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 RANBP6O60518 1105 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 ZSCAN16Q9H4T2 348 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 KLHL40Q2TBA0 621 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 KLHL10Q6JEL2 608 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 SAMM50Q9Y512 469 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 GMNNO75496 209 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 KRT13P13646 458 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 ATL3Q6DD88 541 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 PRC1O43663 620 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 TMEM132EQ6IEE7 984 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 CCDC110Q8TBZ0 833 aa10.14□□□□□ -0.79
SHROOM4-203ENST00000460112 HMGB3O15347 200 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 VIMP08670 466 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms