RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 ARFGEF2Q9Y6D5 1785 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 CHL1O00533 1208 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 HOXA10P31260 410 aaPredicted RBP20.47■□□□□ 0.87
NCDN-206ENST00000459931 IARSP41252 1262 aaKnown RBP20.47■□□□□ 0.87
NCDN-206ENST00000459931 CC2D2BQ6DHV5 1058 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 CHADLQ6NUI6 762 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 LRP10Q7Z4F1 713 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
NCDN-206ENST00000459931 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
NCDN-206ENST00000459931 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
NCDN-206ENST00000459931 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
NCDN-206ENST00000459931 NTSR2O95665 410 aa20.46■□□□□ 0.87
NCDN-206ENST00000459931 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
NCDN-206ENST00000459931 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
NCDN-206ENST00000459931 PCNTO95613 3336 aa20.46■□□□□ 0.87
NCDN-206ENST00000459931 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
NCDN-206ENST00000459931 JMYQ8N9B5 988 aa20.45■□□□□ 0.86
NCDN-206ENST00000459931 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
NCDN-206ENST00000459931 CRAMP1Q96RY5 1269 aa20.45■□□□□ 0.86
NCDN-206ENST00000459931 PSMD1Q99460 953 aa20.45■□□□□ 0.86
NCDN-206ENST00000459931 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
NCDN-206ENST00000459931 POTEIP0CG38 1075 aa20.44■□□□□ 0.86
NCDN-206ENST00000459931 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
NCDN-206ENST00000459931 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
NCDN-206ENST00000459931 GRIPAP1Q4V328 841 aa20.44■□□□□ 0.86
NCDN-206ENST00000459931 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
NCDN-206ENST00000459931 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
NCDN-206ENST00000459931 FZD9O00144 591 aa20.43■□□□□ 0.86
NCDN-206ENST00000459931 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
NCDN-206ENST00000459931 DDX21Q9NR30 783 aaKnown RBP eCLIP20.43■□□□□ 0.86
NCDN-206ENST00000459931 ZNF541Q9H0D2 1346 aa20.43■□□□□ 0.86
NCDN-206ENST00000459931 PPEF1O14829 653 aaPredicted RBP20.42■□□□□ 0.86
NCDN-206ENST00000459931 SLC10A5Q5PT55 438 aa20.42■□□□□ 0.86
NCDN-206ENST00000459931 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
NCDN-206ENST00000459931 HACL1Q9UJ83 578 aa20.42■□□□□ 0.86
NCDN-206ENST00000459931 RIC1Q4ADV7 1423 aa20.42■□□□□ 0.86
NCDN-206ENST00000459931 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
NCDN-206ENST00000459931 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
NCDN-206ENST00000459931 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
NCDN-206ENST00000459931 TRMT112Q9UI30 125 aaKnown RBP20.41■□□□□ 0.86
NCDN-206ENST00000459931 HDGFL1Q5TGJ6 251 aa20.4■□□□□ 0.86
NCDN-206ENST00000459931 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
NCDN-206ENST00000459931 GPC2Q8N158 579 aa20.4■□□□□ 0.86
NCDN-206ENST00000459931 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
NCDN-206ENST00000459931 CLEC11AQ9Y240 323 aa20.4■□□□□ 0.86
NCDN-206ENST00000459931 EIF6P56537 245 aaKnown RBP20.39■□□□□ 0.85
NCDN-206ENST00000459931 LARGE2Q8N3Y3 721 aa20.39■□□□□ 0.85
NCDN-206ENST00000459931 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
NCDN-206ENST00000459931 GJA3Q9Y6H8 435 aa20.39■□□□□ 0.85
NCDN-206ENST00000459931 RNF123Q5XPI4 1314 aa20.38■□□□□ 0.85
NCDN-206ENST00000459931 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
NCDN-206ENST00000459931 EPHX2P34913 555 aa20.38■□□□□ 0.85
NCDN-206ENST00000459931 ANKRD13DQ6ZTN6 518 aa20.38■□□□□ 0.85
NCDN-206ENST00000459931 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
NCDN-206ENST00000459931 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
NCDN-206ENST00000459931 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
NCDN-206ENST00000459931 HOXB7P09629 217 aa20.37■□□□□ 0.85
NCDN-206ENST00000459931 ZNF428Q96B54 188 aa20.37■□□□□ 0.85
NCDN-206ENST00000459931 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
NCDN-206ENST00000459931 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
NCDN-206ENST00000459931 APAF1O14727 1248 aa20.36■□□□□ 0.85
NCDN-206ENST00000459931 BBOX1O75936 387 aa20.36■□□□□ 0.85
NCDN-206ENST00000459931 DUSP27Q5VZP5 1158 aa20.36■□□□□ 0.85
NCDN-206ENST00000459931 ABCC4O15439 1325 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 SCN4AP35499 1836 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
NCDN-206ENST00000459931 SLC51AQ86UW1 340 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 MBIPQ9NS73 344 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
NCDN-206ENST00000459931 PPIP5K2O43314 1243 aa20.34■□□□□ 0.85
NCDN-206ENST00000459931 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
NCDN-206ENST00000459931 NIM1KQ8IY84 436 aa20.34■□□□□ 0.85
NCDN-206ENST00000459931 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.85
NCDN-206ENST00000459931 SP8Q8IXZ3 490 aa20.33■□□□□ 0.85
NCDN-206ENST00000459931 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.85
NCDN-206ENST00000459931 VPS33BQ9H267 617 aa20.33■□□□□ 0.85
NCDN-206ENST00000459931 MKRN1Q9UHC7 482 aaKnown RBP20.33■□□□□ 0.85
NCDN-206ENST00000459931 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
NCDN-206ENST00000459931 ITGBL1O95965 494 aaPredicted RBP20.32■□□□□ 0.84
NCDN-206ENST00000459931 AOC3Q16853 763 aa20.32■□□□□ 0.84
NCDN-206ENST00000459931 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
NCDN-206ENST00000459931 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
NCDN-206ENST00000459931 PASKQ96RG2 1323 aa20.31■□□□□ 0.84
NCDN-206ENST00000459931 TMEM88BA6NKF7 163 aa20.31■□□□□ 0.84
NCDN-206ENST00000459931 ELL2O00472 640 aaPredicted RBP20.31■□□□□ 0.84
NCDN-206ENST00000459931 GNAI1P63096 354 aa20.31■□□□□ 0.84
NCDN-206ENST00000459931 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
NCDN-206ENST00000459931 MAP1SQ66K74 1059 aaPredicted RBP20.31■□□□□ 0.84
NCDN-206ENST00000459931 MPNDQ8N594 471 aa20.31■□□□□ 0.84
NCDN-206ENST00000459931 ZNF853P0CG23 659 aa20.3■□□□□ 0.84
NCDN-206ENST00000459931 HSPA1AP0DMV8 641 aaKnown RBP20.3■□□□□ 0.84
NCDN-206ENST00000459931 HSPA1BP0DMV9 641 aaKnown RBP20.3■□□□□ 0.84
NCDN-206ENST00000459931 GRAPQ13588 217 aa20.3■□□□□ 0.84
NCDN-206ENST00000459931 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
NCDN-206ENST00000459931 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
NCDN-206ENST00000459931 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
NCDN-206ENST00000459931 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms