RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 JDP2Q8WYK2 163 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 COL4A5P29400 1685 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
HDLBP-227ENST00000458564 FOXN1O15353 648 aa13.8□□□□□ -0.2
HDLBP-227ENST00000458564 VEGFBP49765 207 aa13.8□□□□□ -0.2
HDLBP-227ENST00000458564 ZNF34Q8IZ26 560 aa13.8□□□□□ -0.2
HDLBP-227ENST00000458564 RPGRQ92834 1020 aaKnown RBP13.8□□□□□ -0.2
HDLBP-227ENST00000458564 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
HDLBP-227ENST00000458564 NTSR2O95665 410 aa13.79□□□□□ -0.2
HDLBP-227ENST00000458564 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
HDLBP-227ENST00000458564 CNTROBQ8N137 903 aa13.79□□□□□ -0.2
HDLBP-227ENST00000458564 NGEFQ8N5V2 710 aa13.79□□□□□ -0.2
HDLBP-227ENST00000458564 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
HDLBP-227ENST00000458564 GPTP24298 496 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
HDLBP-227ENST00000458564 PARP10Q53GL7 1025 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-227ENST00000458564 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 THUMPD2Q9BTF0 503 aaKnown RBP13.78□□□□□ -0.2
HDLBP-227ENST00000458564 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
HDLBP-227ENST00000458564 ZBTB3Q9H5J0 574 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 LTBP1Q14766 1721 aa13.78□□□□□ -0.2
HDLBP-227ENST00000458564 MYL6BP14649 208 aa13.77□□□□□ -0.21
HDLBP-227ENST00000458564 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-227ENST00000458564 SCNN1DP51172 638 aa13.77□□□□□ -0.21
HDLBP-227ENST00000458564 AIDAQ96BJ3 306 aa13.77□□□□□ -0.21
HDLBP-227ENST00000458564 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
HDLBP-227ENST00000458564 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
HDLBP-227ENST00000458564 THSD7BQ9C0I4 1608 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 PPEF1O14829 653 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-227ENST00000458564 LMOD1P29536 600 aaPredicted RBP13.76□□□□□ -0.21
HDLBP-227ENST00000458564 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 LARGE2Q8N3Y3 721 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 BABAM1Q9NWV8 329 aa13.76□□□□□ -0.21
HDLBP-227ENST00000458564 PDIA6Q15084 440 aa13.75□□□□□ -0.21
HDLBP-227ENST00000458564 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
HDLBP-227ENST00000458564 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDLBP-227ENST00000458564 DEFB115Q30KQ5 88 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-227ENST00000458564 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
HDLBP-227ENST00000458564 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
HDLBP-227ENST00000458564 EPS15P42566 896 aa13.73□□□□□ -0.21
HDLBP-227ENST00000458564 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-227ENST00000458564 NIM1KQ8IY84 436 aa13.73□□□□□ -0.21
HDLBP-227ENST00000458564 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
HDLBP-227ENST00000458564 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-227ENST00000458564 ABCC4O15439 1325 aa13.72□□□□□ -0.21
HDLBP-227ENST00000458564 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
HDLBP-227ENST00000458564 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
HDLBP-227ENST00000458564 ABT1Q9ULW3 272 aaKnown RBP13.72□□□□□ -0.21
HDLBP-227ENST00000458564 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 HSPA8P11142 646 aaKnown RBP13.71□□□□□ -0.21
HDLBP-227ENST00000458564 LBX1P52954 281 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 AOC3Q16853 763 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 SUPT20HQ8NEM7 779 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
HDLBP-227ENST00000458564 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
HDLBP-227ENST00000458564 GPRC5DQ9NZD1 345 aa13.71□□□□□ -0.21
HDLBP-227ENST00000458564 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.22
HDLBP-227ENST00000458564 BBOX1O75936 387 aa13.7□□□□□ -0.22
HDLBP-227ENST00000458564 ECE1P42892 770 aa13.7□□□□□ -0.22
HDLBP-227ENST00000458564 RIPK4P57078 832 aa13.7□□□□□ -0.22
HDLBP-227ENST00000458564 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
HDLBP-227ENST00000458564 ZNRF3Q9ULT6 936 aa13.7□□□□□ -0.22
HDLBP-227ENST00000458564 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
HDLBP-227ENST00000458564 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
HDLBP-227ENST00000458564 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
HDLBP-227ENST00000458564 CXCL9Q07325 125 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 KIAA2012Q0VF49 1180 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 CST9Q5W186 159 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 SP8Q8IXZ3 490 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 CAPNS2Q96L46 248 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 TLL2Q9Y6L7 1015 aa13.69□□□□□ -0.22
HDLBP-227ENST00000458564 LAMB2P55268 1798 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 ANXA1P04083 346 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.221e-8■■■■□ 19.7
HDLBP-227ENST00000458564 TCIRG1Q13488 830 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 RALBP1Q15311 655 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-227ENST00000458564 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 PGAP2Q9UHJ9 254 aa13.68□□□□□ -0.22
HDLBP-227ENST00000458564 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 TRAF5O00463 557 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 GMPSP49915 693 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms