RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TMX1Q9H3N1 280 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 TUBB4AP04350 444 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 JAKMIP1Q96N16 626 aaKnown RBP16.6■□□□□ 0.25
TOP3B-214ENST00000457270 NR1I2O75469 434 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 APPP05067 770 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 PNMA6AP0CW24 399 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-214ENST00000457270 MMP14P50281 582 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 CLCN6P51797 869 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 GTF2A1P52655 376 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-214ENST00000457270 NME9Q86XW9 330 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-214ENST00000457270 PLA2G4AP47712 749 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 PXDNLA1KZ92 1463 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 IDI1Q13907 227 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 ADCK5Q3MIX3 580 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
TOP3B-214ENST00000457270 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
TOP3B-214ENST00000457270 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.25
TOP3B-214ENST00000457270 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.25
TOP3B-214ENST00000457270 ZRANB2O95218 330 aaKnown RBP eCLIP16.58■□□□□ 0.24
TOP3B-214ENST00000457270 GSDMDP57764 484 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 TXLNBQ8N3L3 684 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 USP42Q9H9J4 1324 aaKnown RBP16.58■□□□□ 0.24
TOP3B-214ENST00000457270 LOC102724159A0A0B4J2E5 919 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
TOP3B-214ENST00000457270 PWP2Q15269 919 aaKnown RBP16.58■□□□□ 0.24
TOP3B-214ENST00000457270 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 COG3Q96JB2 828 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 SLC52A1Q9NWF4 448 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
TOP3B-214ENST00000457270 TPM4P67936 248 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
TOP3B-214ENST00000457270 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 CWC27Q6UX04 472 aaKnown RBP16.57■□□□□ 0.24
TOP3B-214ENST00000457270 FERMT3Q86UX7 667 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 TRMT1Q9NXH9 659 aaKnown RBP16.57■□□□□ 0.24
TOP3B-214ENST00000457270 FAM208AQ9UK61 1670 aaKnown RBP16.57■□□□□ 0.24
TOP3B-214ENST00000457270 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
TOP3B-214ENST00000457270 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 PGBD1Q96JS3 809 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
TOP3B-214ENST00000457270 ATP8B1O43520 1251 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 KCNJ6P48051 423 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 MON2Q7Z3U7 1717 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 CTAGE5O15320 804 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 MLECQ14165 292 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 POLA2Q14181 598 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 STX1AQ16623 288 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 FLIIQ13045 1269 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 UBXN6Q9BZV1 441 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-214ENST00000457270 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
TOP3B-214ENST00000457270 PSEN1P49768 467 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 PTH1RQ03431 593 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
TOP3B-214ENST00000457270 C11orf57Q6ZUT1 292 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-214ENST00000457270 C10orf67Q8IYJ2 551 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 BICD2Q8TD16 824 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.241e-8■■□□□ 11.9
TOP3B-214ENST00000457270 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 CLGNO14967 610 aa16.55■□□□□ 0.24
TOP3B-214ENST00000457270 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
TOP3B-214ENST00000457270 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-214ENST00000457270 TFIP11Q9UBB9 837 aaKnown RBP16.55■□□□□ 0.24
TOP3B-214ENST00000457270 NPHP1O15259 732 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 DTNBO60941 627 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-214ENST00000457270 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 SYT10Q6XYQ8 523 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 TSPYL4Q9UJ04 414 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 C3P01024 1663 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 CPS1P31327 1500 aa16.54■□□□□ 0.24
TOP3B-214ENST00000457270 ANKRD1Q15327 319 aa16.53■□□□□ 0.24
TOP3B-214ENST00000457270 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
TOP3B-214ENST00000457270 TMCO3Q6UWJ1 677 aa16.53■□□□□ 0.24
TOP3B-214ENST00000457270 UBTFL1P0CB47 393 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms