RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
PTCHD1-202ENST00000456522 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
PTCHD1-202ENST00000456522 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
PTCHD1-202ENST00000456522 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
PTCHD1-202ENST00000456522 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 FANCIQ9NVI1 1328 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 KCNQ3O43525 872 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 KCNQ2O43526 872 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 PIGBQ92521 554 aa12.16□□□□□ -0.46
PTCHD1-202ENST00000456522 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 FLIIQ13045 1269 aa12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
PTCHD1-202ENST00000456522 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 ZMYND15Q9H091 742 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 BABAM1Q9NWV8 329 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
PTCHD1-202ENST00000456522 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 BCL9O00512 1426 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 BTAF1O14981 1849 aa12.13□□□□□ -0.47
PTCHD1-202ENST00000456522 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
PTCHD1-202ENST00000456522 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
PTCHD1-202ENST00000456522 TRIM37O94972 964 aa12.12□□□□□ -0.47
PTCHD1-202ENST00000456522 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
PTCHD1-202ENST00000456522 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
PTCHD1-202ENST00000456522 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 DIXDC1Q155Q3 683 aa12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTCHD1-202ENST00000456522 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
PTCHD1-202ENST00000456522 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
PTCHD1-202ENST00000456522 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
PTCHD1-202ENST00000456522 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
PTCHD1-202ENST00000456522 CD46P15529 392 aa12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 DNAJB2P25686 324 aa12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 TATDN2Q93075 761 aa12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 ARXQ96QS3 562 aa12.09□□□□□ -0.47
PTCHD1-202ENST00000456522 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
PTCHD1-202ENST00000456522 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 C5P01031 1676 aa12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 VAMP4O75379 141 aa12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-202ENST00000456522 APBA3O96018 575 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 SULF1Q8IWU6 871 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 RCAN3Q9UKA8 241 aa12.06□□□□□ -0.48
PTCHD1-202ENST00000456522 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 KCNQ4P56696 695 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 SIK1P57059 783 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
PTCHD1-202ENST00000456522 TNS1Q9HBL0 1735 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 HOXB7P09629 217 aa12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-202ENST00000456522 LY75O60449 1722 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 TJP1Q07157 1748 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 BCAR3O75815 825 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 ITPK1Q13572 414 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms