RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 GPBP1L1Q9HC44 474 aaPredicted RBP30.69■■■□□ 2.5
UBP1-205ENST00000456378 ANKRD36CQ5JPF3 1778 aa30.69■■■□□ 2.5
UBP1-205ENST00000456378 CACNA1SQ13698 1873 aa30.68■■■□□ 2.5
UBP1-205ENST00000456378 C3orf67Q6ZVT6 689 aa30.68■■■□□ 2.5
UBP1-205ENST00000456378 ARFGEF2Q9Y6D5 1785 aa30.67■■■□□ 2.5
UBP1-205ENST00000456378 RIC1Q4ADV7 1423 aa30.67■■■□□ 2.5
UBP1-205ENST00000456378 SLC10A5Q5PT55 438 aa30.66■■■□□ 2.5
UBP1-205ENST00000456378 SYNE4Q8N205 404 aa30.66■■■□□ 2.5
UBP1-205ENST00000456378 CCDC30Q5VVM6 783 aa30.65■■■□□ 2.5
UBP1-205ENST00000456378 SPINK5Q9NQ38 1064 aaPredicted RBP30.65■■■□□ 2.5
UBP1-205ENST00000456378 FANCIQ9NVI1 1328 aa30.65■■■□□ 2.5
UBP1-205ENST00000456378 LMNB1P20700 586 aa30.64■■■□□ 2.5
UBP1-205ENST00000456378 ZNF428Q96B54 188 aa30.64■■■□□ 2.5
UBP1-205ENST00000456378 ISCA1Q9BUE6 129 aa30.64■■■□□ 2.5
UBP1-205ENST00000456378 FER1L6Q2WGJ9 1857 aa30.63■■■□□ 2.49
UBP1-205ENST00000456378 TWISTNBQ3B726 338 aaPredicted RBP30.63■■■□□ 2.49
UBP1-205ENST00000456378 ATP5J2-PTCD1G3V325 749 aa30.62■■■□□ 2.49
UBP1-205ENST00000456378 TCERG1O14776 1098 aaKnown RBP30.62■■■□□ 2.49
UBP1-205ENST00000456378 ALDH1B1P30837 517 aa30.62■■■□□ 2.49
UBP1-205ENST00000456378 HOXA10P31260 410 aaPredicted RBP30.62■■■□□ 2.49
UBP1-205ENST00000456378 OLFM4Q6UX06 510 aa30.62■■■□□ 2.49
UBP1-205ENST00000456378 TRMT112Q9UI30 125 aaKnown RBP30.61■■■□□ 2.49
UBP1-205ENST00000456378 RNF123Q5XPI4 1314 aa30.6■■■□□ 2.49
UBP1-205ENST00000456378 CHMP4AQ9BY43 222 aa30.6■■■□□ 2.49
UBP1-205ENST00000456378 LTBP3Q9NS15 1303 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 HCLS1P14317 486 aaPredicted RBP30.59■■■□□ 2.49
UBP1-205ENST00000456378 C1QTNF8P60827 252 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 GOLGA2Q08379 1002 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 SOGA3Q5TF21 947 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 RIC3Q7Z5B4 369 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 RPGRQ92834 1020 aaKnown RBP30.59■■■□□ 2.49
UBP1-205ENST00000456378 NLRP3Q96P20 1036 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 CCDC88AQ3V6T2 1871 aa30.59■■■□□ 2.49
UBP1-205ENST00000456378 SH3TC1Q8TE82 1336 aa30.57■■■□□ 2.48
UBP1-205ENST00000456378 KIF3CO14782 793 aa30.57■■■□□ 2.48
UBP1-205ENST00000456378 TRIM28Q13263 835 aaKnown RBP30.57■■■□□ 2.48
UBP1-205ENST00000456378 CCDC93Q567U6 631 aa30.57■■■□□ 2.48
UBP1-205ENST00000456378 CRAMP1Q96RY5 1269 aa30.57■■■□□ 2.48
UBP1-205ENST00000456378 TAOK3Q9H2K8 898 aa30.57■■■□□ 2.48
UBP1-205ENST00000456378 ZNF521Q96K83 1311 aa30.56■■■□□ 2.48
UBP1-205ENST00000456378 EXOSC9Q06265 439 aaKnown RBP30.56■■■□□ 2.48
UBP1-205ENST00000456378 RBM17Q96I25 401 aaKnown RBP30.56■■■□□ 2.48
UBP1-205ENST00000456378 VAMP4O75379 141 aa30.55■■■□□ 2.48
UBP1-205ENST00000456378 SLC51AQ86UW1 340 aa30.55■■■□□ 2.48
UBP1-205ENST00000456378 NMRK2Q9NPI5 230 aa30.55■■■□□ 2.48
UBP1-205ENST00000456378 G2E3Q7L622 706 aa30.54■■■□□ 2.48
UBP1-205ENST00000456378 FAM89AQ96GI7 184 aa30.54■■■□□ 2.48
UBP1-205ENST00000456378 STK31Q9BXU1 1019 aa30.54■■■□□ 2.48
UBP1-205ENST00000456378 ZC3H4Q9UPT8 1303 aaKnown RBP30.53■■■□□ 2.48
UBP1-205ENST00000456378 CCER2I3L3R5 266 aa30.53■■■□□ 2.48
UBP1-205ENST00000456378 MYD88Q99836 296 aa30.53■■■□□ 2.48
UBP1-205ENST00000456378 LAMB2P55268 1798 aa30.52■■■□□ 2.48
UBP1-205ENST00000456378 SLC4A2P04920 1241 aa30.52■■■□□ 2.48
UBP1-205ENST00000456378 SNED1Q8TER0 1413 aa30.52■■■□□ 2.48
UBP1-205ENST00000456378 DDX58O95786 925 aaKnown RBP30.51■■■□□ 2.47
UBP1-205ENST00000456378 RTKN2Q8IZC4 609 aa30.51■■■□□ 2.47
UBP1-205ENST00000456378 METTL22Q9BUU2 404 aaPredicted RBP30.51■■■□□ 2.47
UBP1-205ENST00000456378 MAP3K2Q9Y2U5 619 aa30.51■■■□□ 2.47
UBP1-205ENST00000456378 FKBP4Q02790 459 aaKnown RBP eCLIP30.5■■■□□ 2.47
UBP1-205ENST00000456378 KSR2Q6VAB6 950 aa30.5■■■□□ 2.47
UBP1-205ENST00000456378 MYH16Q9H6N6 1097 aa30.5■■■□□ 2.47
UBP1-205ENST00000456378 TIAM2Q8IVF5 1701 aa30.5■■■□□ 2.47
UBP1-205ENST00000456378 PI4KAP2A4QPH2 592 aa30.49■■■□□ 2.47
UBP1-205ENST00000456378 RTL5Q5HYW3 569 aaPredicted RBP30.49■■■□□ 2.47
UBP1-205ENST00000456378 PI4KAP1Q8N8J0 262 aa30.49■■■□□ 2.47
UBP1-205ENST00000456378 DICER1Q9UPY3 1922 aaKnown RBP30.49■■■□□ 2.47
UBP1-205ENST00000456378 ABCC4O15439 1325 aa30.48■■■□□ 2.47
UBP1-205ENST00000456378 KDM2BQ8NHM5 1336 aa30.48■■■□□ 2.47
UBP1-205ENST00000456378 DDX60Q8IY21 1712 aaKnown RBP30.48■■■□□ 2.47
UBP1-205ENST00000456378 PPEF1O14829 653 aaPredicted RBP30.48■■■□□ 2.47
UBP1-205ENST00000456378 ZNF277Q9NRM2 450 aaPredicted RBP30.48■■■□□ 2.47
UBP1-205ENST00000456378 GLTPD2A6NH11 291 aa30.47■■■□□ 2.47
UBP1-205ENST00000456378 CCDC191Q8NCU4 936 aa30.47■■■□□ 2.47
UBP1-205ENST00000456378 CC2D2BQ6DHV5 1058 aa30.46■■■□□ 2.47
UBP1-205ENST00000456378 ZBTB38Q8NAP3 1195 aaPredicted RBP30.46■■■□□ 2.47
UBP1-205ENST00000456378 RRAGCQ9HB90 399 aa30.46■■■□□ 2.47
UBP1-205ENST00000456378 IRS4O14654 1257 aaPredicted RBP30.45■■■□□ 2.47
UBP1-205ENST00000456378 IGKV5-2P06315 115 aa30.44■■■□□ 2.46
UBP1-205ENST00000456378 FLIIQ13045 1269 aa30.44■■■□□ 2.46
UBP1-205ENST00000456378 JARID2Q92833 1246 aaPredicted RBP30.44■■■□□ 2.46
UBP1-205ENST00000456378 PSMD1Q99460 953 aa30.44■■■□□ 2.46
UBP1-205ENST00000456378 SF3B3Q15393 1217 aaKnown RBP30.43■■■□□ 2.46
UBP1-205ENST00000456378 DDX46Q7L014 1031 aaKnown RBP30.43■■■□□ 2.46
UBP1-205ENST00000456378 CWC25Q9NXE8 425 aaPredicted RBP30.43■■■□□ 2.46
UBP1-205ENST00000456378 ATP6V0A2Q9Y487 856 aa30.43■■■□□ 2.46
UBP1-205ENST00000456378 BBOX1O75936 387 aa30.42■■■□□ 2.46
UBP1-205ENST00000456378 PCCAP05165 728 aaPredicted RBP30.41■■■□□ 2.46
UBP1-205ENST00000456378 GRAPQ13588 217 aa30.41■■■□□ 2.46
UBP1-205ENST00000456378 GRAPLQ8TC17 118 aaPredicted RBP30.41■■■□□ 2.46
UBP1-205ENST00000456378 TAF1P21675 1872 aa30.41■■■□□ 2.46
UBP1-205ENST00000456378 IARSP41252 1262 aaKnown RBP30.4■■■□□ 2.46
UBP1-205ENST00000456378 DPY19L2Q6NUT2 758 aa30.39■■■□□ 2.46
UBP1-205ENST00000456378 POTECB2RU33 542 aa30.38■■■□□ 2.45
UBP1-205ENST00000456378 TOMM70O94826 608 aa30.38■■■□□ 2.45
UBP1-205ENST00000456378 CWF19L2Q2TBE0 894 aaKnown RBP30.38■■■□□ 2.45
UBP1-205ENST00000456378 GRIPAP1Q4V328 841 aa30.38■■■□□ 2.45
UBP1-205ENST00000456378 SP8Q8IXZ3 490 aa30.38■■■□□ 2.45
UBP1-205ENST00000456378 COL4A1P02462 1669 aa30.38■■■□□ 2.45
UBP1-205ENST00000456378 CACNA1FO60840 1977 aa30.37■■■□□ 2.45
UBP1-205ENST00000456378 FKBP5Q13451 457 aaPredicted RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms