RNA–Protein interactions for RNA: ENST00000455163.1

LINC02249-201, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

Gene LINC02249, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-201ENST00000455163 MPNDQ8N594 471 aa5.67□□□□□ -1.5
LINC02249-201ENST00000455163 SYMPKQ92797 1274 aaKnown RBP5.67□□□□□ -1.5
LINC02249-201ENST00000455163 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
LINC02249-201ENST00000455163 NUDT12Q9BQG2 462 aa5.67□□□□□ -1.5
LINC02249-201ENST00000455163 COL25A1Q9BXS0 654 aaPredicted RBP5.67□□□□□ -1.5
LINC02249-201ENST00000455163 CENPJQ9HC77 1338 aaPredicted RBP5.67□□□□□ -1.5
LINC02249-201ENST00000455163 CPDO75976 1380 aa5.67□□□□□ -1.5
LINC02249-201ENST00000455163 ZBTB7CA1YPR0 619 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 GNPATO15228 680 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 APBA3O96018 575 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 ADH1CP00326 375 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 GCP02774 474 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 EVA1CP58658 441 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 SRPK2P78362 688 aaKnown RBP5.66□□□□□ -1.5
LINC02249-201ENST00000455163 KANK3Q6NY19 840 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 BARGINQ6ZT62 677 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 PTF1AQ7RTS3 328 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 L3MBTL2Q969R5 705 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 CABP1Q9NZU7 370 aa5.66□□□□□ -1.5
LINC02249-201ENST00000455163 USP6P35125 1406 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 KDM4AO75164 1064 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 SLURP2P0DP57 97 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 C6orf118Q5T5N4 469 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 FAM196AQ6ZSG2 479 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 TCP11L2Q8N4U5 519 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 SVOPQ8N4V2 548 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 ZFAND3Q9H8U3 227 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 DNMT3LQ9UJW3 386 aa5.65□□□□□ -1.5
LINC02249-201ENST00000455163 MON2Q7Z3U7 1717 aa5.65□□□□□ -1.51
LINC02249-201ENST00000455163 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 PDE3BQ13370 1112 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 NLRP13Q86W25 1043 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 RGPD3A6NKT7 1758 aaPredicted RBP5.64□□□□□ -1.51
LINC02249-201ENST00000455163 LTN1O94822 1766 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 RGPD4Q7Z3J3 1758 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 CASZ1Q86V15 1759 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 GOLGB1Q14789 3259 aaKnown RBP5.64□□□□□ -1.51
LINC02249-201ENST00000455163 CRB1P82279 1406 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 NFAT5O94916 1531 aa5.64□□□□□ -1.51
LINC02249-201ENST00000455163 SEMA3EO15041 775 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 NEUROD1Q13562 356 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 PLA2G4EQ3MJ16 856 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 LINC01559Q495D7 138 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 NANOS1Q8WY41 292 aaKnown RBP5.63□□□□□ -1.51
LINC02249-201ENST00000455163 BAP1Q92560 729 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 AATKQ6ZMQ8 1374 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 CPSF1Q10570 1443 aaKnown RBP5.63□□□□□ -1.51
LINC02249-201ENST00000455163 CD163L1Q9NR16 1453 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 USP54Q70EL1 1684 aa5.63□□□□□ -1.51
LINC02249-201ENST00000455163 MSTNO14793 375 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 HOXA2O43364 376 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 VARSP26640 1264 aaKnown RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 RBM26Q5T8P6 1007 aaKnown RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 ARHGEF25Q86VW2 580 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 MARCH10Q8NA82 808 aaPredicted RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 SPOCK3Q9BQ16 436 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 PDGFDQ9GZP0 370 aaPredicted RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 TTC21BQ7Z4L5 1316 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 EVC2Q86UK5 1308 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 BRD4O60885 1362 aaPredicted RBP5.62□□□□□ -1.51
LINC02249-201ENST00000455163 PARD3Q8TEW0 1356 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 OVOS2A0A0G2JMS6 1433 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 OVOS2A0A0J9YW53 1432 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 OVOS2Q6IE36 1432 aa5.62□□□□□ -1.51
LINC02249-201ENST00000455163 ROCK2O75116 1388 aaKnown RBP5.61□□□□□ -1.51
LINC02249-201ENST00000455163 ZIC2O95409 532 aaPredicted RBP5.61□□□□□ -1.51
LINC02249-201ENST00000455163 PROCP04070 461 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 NR3C2P08235 984 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 RGPD2P0DJD1 1756 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 MYOM1P52179 1685 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 TOM1L2Q6ZVM7 507 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 WDR17Q8IZU2 1322 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 Q8N3U1 123 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 KAT6BQ8WYB5 2073 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 UNC93B1Q9H1C4 597 aa5.61□□□□□ -1.51
LINC02249-201ENST00000455163 NHSQ6T4R5 1651 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 KTN1Q86UP2 1357 aaKnown RBP5.6□□□□□ -1.51
LINC02249-201ENST00000455163 MARSP56192 900 aaKnown RBP5.6□□□□□ -1.51
LINC02249-201ENST00000455163 DDB1Q16531 1140 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 NME9Q86XW9 330 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 SCARF2Q96GP6 870 aaPredicted RBP5.6□□□□□ -1.51
LINC02249-201ENST00000455163 CFAP44Q96MT7 982 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 EVA1BQ9NVM1 165 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 BTAF1O14981 1849 aa5.6□□□□□ -1.51
LINC02249-201ENST00000455163 SBNO2Q9Y2G9 1366 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 PLSCR1O15162 318 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 KCNQ2O43526 872 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 CCNYL3P0C7X3 344 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 USP46P62068 366 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 PTSQ03393 145 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 NBPF14Q5TI25 921 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 PAXIP1Q6ZW49 1069 aaPredicted RBP5.59□□□□□ -1.51
LINC02249-201ENST00000455163 RETREG3Q86VR2 466 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC02249-201ENST00000455163 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 ZNF511Q8NB15 262 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 DCAF5Q96JK2 942 aa5.59□□□□□ -1.51
LINC02249-201ENST00000455163 CDK15Q96Q40 435 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms