RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 CNTNAP1P78357 1384 aa22.37■■□□□ 1.17
CR559946.1-201ENST00000453835 ADAMTSL1Q8N6G6 1762 aa22.36■■□□□ 1.17
CR559946.1-201ENST00000453835 HOXA10P31260 410 aaPredicted RBP22.36■■□□□ 1.17
CR559946.1-201ENST00000453835 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
CR559946.1-201ENST00000453835 CLEC11AQ9Y240 323 aa22.36■■□□□ 1.17
CR559946.1-201ENST00000453835 NTSR2O95665 410 aa22.35■■□□□ 1.17
CR559946.1-201ENST00000453835 RPGRQ92834 1020 aaKnown RBP22.35■■□□□ 1.17
CR559946.1-201ENST00000453835 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 MAP1SQ66K74 1059 aaPredicted RBP22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 GIGYF2Q6Y7W6 1299 aaKnown RBP22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 LRP10Q7Z4F1 713 aa22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 GPC2Q8N158 579 aa22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 IBTKQ9P2D0 1353 aaPredicted RBP22.34■■□□□ 1.17
CR559946.1-201ENST00000453835 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
CR559946.1-201ENST00000453835 TMEM88BA6NKF7 163 aa22.33■■□□□ 1.17
CR559946.1-201ENST00000453835 PDIA6Q15084 440 aa22.33■■□□□ 1.17
CR559946.1-201ENST00000453835 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
CR559946.1-201ENST00000453835 TSPYL4Q9UJ04 414 aa22.33■■□□□ 1.17
CR559946.1-201ENST00000453835 FOXN1O15353 648 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 ANXA1P04083 346 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 VEGFBP49765 207 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 PROSER3Q2NL68 480 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 GJA3Q9Y6H8 435 aa22.32■■□□□ 1.16
CR559946.1-201ENST00000453835 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 PNMA8AQ86V59 439 aaPredicted RBP22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 ERBB4Q15303 1308 aa22.31■■□□□ 1.16
CR559946.1-201ENST00000453835 PPEF1O14829 653 aaPredicted RBP22.3■■□□□ 1.16
CR559946.1-201ENST00000453835 RIPK4P57078 832 aa22.3■■□□□ 1.16
CR559946.1-201ENST00000453835 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
CR559946.1-201ENST00000453835 EIF6P56537 245 aaKnown RBP22.29■■□□□ 1.16
CR559946.1-201ENST00000453835 LARGE2Q8N3Y3 721 aa22.29■■□□□ 1.16
CR559946.1-201ENST00000453835 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
CR559946.1-201ENST00000453835 EPS15P42566 896 aa22.27■■□□□ 1.16
CR559946.1-201ENST00000453835 SCNN1DP51172 638 aa22.27■■□□□ 1.16
CR559946.1-201ENST00000453835 FMR1Q06787 632 aaKnown RBP eCLIP22.27■■□□□ 1.16
CR559946.1-201ENST00000453835 PARP10Q53GL7 1025 aa22.27■■□□□ 1.16
CR559946.1-201ENST00000453835 NECTIN2Q92692 538 aa22.27■■□□□ 1.16
CR559946.1-201ENST00000453835 SLC10A5Q5PT55 438 aa22.26■■□□□ 1.15
CR559946.1-201ENST00000453835 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
CR559946.1-201ENST00000453835 UTP14AQ9BVJ6 771 aaKnown RBP22.26■■□□□ 1.15
CR559946.1-201ENST00000453835 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
CR559946.1-201ENST00000453835 AOC3Q16853 763 aa22.25■■□□□ 1.15
CR559946.1-201ENST00000453835 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
CR559946.1-201ENST00000453835 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
CR559946.1-201ENST00000453835 LMOD1P29536 600 aaPredicted RBP22.24■■□□□ 1.15
CR559946.1-201ENST00000453835 AIMP1Q12904 312 aaKnown RBP22.24■■□□□ 1.15
CR559946.1-201ENST00000453835 ATP6V0A2Q9Y487 856 aa22.24■■□□□ 1.15
CR559946.1-201ENST00000453835 ABCC4O15439 1325 aa22.24■■□□□ 1.15
CR559946.1-201ENST00000453835 PPIP5K2O43314 1243 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 KRT24Q2M2I5 525 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 DEFB115Q30KQ5 88 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 NIM1KQ8IY84 436 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 XAGE3Q8WTP9 111 aa22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 DDX21Q9NR30 783 aaKnown RBP eCLIP22.23■■□□□ 1.15
CR559946.1-201ENST00000453835 HCLS1P14317 486 aaPredicted RBP22.22■■□□□ 1.15
CR559946.1-201ENST00000453835 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
CR559946.1-201ENST00000453835 ZNF428Q96B54 188 aa22.22■■□□□ 1.15
CR559946.1-201ENST00000453835 BABAM1Q9NWV8 329 aa22.22■■□□□ 1.15
CR559946.1-201ENST00000453835 WBP1LQ9NX94 342 aa22.22■■□□□ 1.15
CR559946.1-201ENST00000453835 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
CR559946.1-201ENST00000453835 ABT1Q9ULW3 272 aaKnown RBP22.21■■□□□ 1.15
CR559946.1-201ENST00000453835 LAMB2P55268 1798 aa22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 CTCFP49711 727 aaPredicted RBP22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 RALBP1Q15311 655 aa22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 NEUROD2Q15784 382 aa22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 AIDAQ96BJ3 306 aa22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
CR559946.1-201ENST00000453835 TRAF5O00463 557 aa22.19■■□□□ 1.14
CR559946.1-201ENST00000453835 CXCL9Q07325 125 aa22.19■■□□□ 1.14
CR559946.1-201ENST00000453835 RTFDC1Q9BY42 306 aaPredicted RBP22.19■■□□□ 1.14
CR559946.1-201ENST00000453835 WDR33Q9C0J8 1336 aaKnown RBP22.19■■□□□ 1.14
CR559946.1-201ENST00000453835 ANKRD36CQ5JPF3 1778 aa22.19■■□□□ 1.14
CR559946.1-201ENST00000453835 LBX1P52954 281 aa22.18■■□□□ 1.14
CR559946.1-201ENST00000453835 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
CR559946.1-201ENST00000453835 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
CR559946.1-201ENST00000453835 USP50Q70EL3 339 aaPredicted RBP22.18■■□□□ 1.14
CR559946.1-201ENST00000453835 TMX4Q9H1E5 349 aaPredicted RBP22.18■■□□□ 1.14
CR559946.1-201ENST00000453835 CHL1O00533 1208 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 BBOX1O75936 387 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 HSP90AB3PQ58FF7 597 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 CST9Q5W186 159 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 SP8Q8IXZ3 490 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 GPRC5DQ9NZD1 345 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 ZNRF3Q9ULT6 936 aa22.17■■□□□ 1.14
CR559946.1-201ENST00000453835 TAF1P21675 1872 aa22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 VPS33BQ9H267 617 aa22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
CR559946.1-201ENST00000453835 GMPSP49915 693 aaPredicted RBP22.15■■□□□ 1.14
CR559946.1-201ENST00000453835 MPNDQ8N594 471 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms