RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
HSPG2-207ENST00000453796 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
HSPG2-207ENST00000453796 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
HSPG2-207ENST00000453796 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
HSPG2-207ENST00000453796 ANKRD13DQ6ZTN6 518 aa18.86■□□□□ 0.61
HSPG2-207ENST00000453796 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
HSPG2-207ENST00000453796 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-207ENST00000453796 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
HSPG2-207ENST00000453796 LTBP3Q9NS15 1303 aa18.85■□□□□ 0.61
HSPG2-207ENST00000453796 LMNB1P20700 586 aa18.85■□□□□ 0.61
HSPG2-207ENST00000453796 WDR63Q8IWG1 891 aa18.85■□□□□ 0.61
HSPG2-207ENST00000453796 UTP14AQ9BVJ6 771 aaKnown RBP18.85■□□□□ 0.61
HSPG2-207ENST00000453796 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
HSPG2-207ENST00000453796 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
HSPG2-207ENST00000453796 SNED1Q8TER0 1413 aa18.84■□□□□ 0.61
HSPG2-207ENST00000453796 SLC10A5Q5PT55 438 aa18.84■□□□□ 0.61
HSPG2-207ENST00000453796 ISCA1Q9BUE6 129 aa18.84■□□□□ 0.61
HSPG2-207ENST00000453796 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.61
HSPG2-207ENST00000453796 HOXA10P31260 410 aaPredicted RBP18.83■□□□□ 0.6
HSPG2-207ENST00000453796 C1QTNF8P60827 252 aa18.83■□□□□ 0.6
HSPG2-207ENST00000453796 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
HSPG2-207ENST00000453796 SALL2Q9Y467 1007 aaPredicted RBP18.83■□□□□ 0.6
HSPG2-207ENST00000453796 FANCIQ9NVI1 1328 aa18.82■□□□□ 0.6
HSPG2-207ENST00000453796 KIF3CO14782 793 aa18.82■□□□□ 0.6
HSPG2-207ENST00000453796 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
HSPG2-207ENST00000453796 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
HSPG2-207ENST00000453796 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
HSPG2-207ENST00000453796 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-207ENST00000453796 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
HSPG2-207ENST00000453796 CHMP4AQ9BY43 222 aa18.81■□□□□ 0.6
HSPG2-207ENST00000453796 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
HSPG2-207ENST00000453796 TAF1P21675 1872 aa18.81■□□□□ 0.6
HSPG2-207ENST00000453796 TRIM28Q13263 835 aaKnown RBP18.8■□□□□ 0.6
HSPG2-207ENST00000453796 CCDC93Q567U6 631 aa18.8■□□□□ 0.6
HSPG2-207ENST00000453796 OLFM4Q6UX06 510 aa18.8■□□□□ 0.6
HSPG2-207ENST00000453796 TAOK3Q9H2K8 898 aa18.8■□□□□ 0.6
HSPG2-207ENST00000453796 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
HSPG2-207ENST00000453796 RPGRQ92834 1020 aaKnown RBP18.79■□□□□ 0.6
HSPG2-207ENST00000453796 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
HSPG2-207ENST00000453796 CRAMP1Q96RY5 1269 aa18.79■□□□□ 0.6
HSPG2-207ENST00000453796 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
HSPG2-207ENST00000453796 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
HSPG2-207ENST00000453796 ATP5J2-PTCD1G3V325 749 aa18.78■□□□□ 0.6
HSPG2-207ENST00000453796 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
HSPG2-207ENST00000453796 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
HSPG2-207ENST00000453796 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
HSPG2-207ENST00000453796 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
HSPG2-207ENST00000453796 RBM17Q96I25 401 aaKnown RBP18.77■□□□□ 0.6
HSPG2-207ENST00000453796 VAMP4O75379 141 aa18.76■□□□□ 0.59
HSPG2-207ENST00000453796 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
HSPG2-207ENST00000453796 ZNF428Q96B54 188 aa18.76■□□□□ 0.59
HSPG2-207ENST00000453796 WDR90Q96KV7 1748 aa18.76■□□□□ 0.59
HSPG2-207ENST00000453796 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
HSPG2-207ENST00000453796 GLTPD2A6NH11 291 aa18.75■□□□□ 0.59
HSPG2-207ENST00000453796 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
HSPG2-207ENST00000453796 EXOSC9Q06265 439 aaKnown RBP18.75■□□□□ 0.59
HSPG2-207ENST00000453796 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
HSPG2-207ENST00000453796 RTKN2Q8IZC4 609 aa18.75■□□□□ 0.59
HSPG2-207ENST00000453796 ABCC4O15439 1325 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
HSPG2-207ENST00000453796 CC2D2BQ6DHV5 1058 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 G2E3Q7L622 706 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 MYD88Q99836 296 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
HSPG2-207ENST00000453796 STK31Q9BXU1 1019 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 LRRC37AA6NMS7 1700 aa18.74■□□□□ 0.59
HSPG2-207ENST00000453796 COL4A1P02462 1669 aa18.73■□□□□ 0.59
HSPG2-207ENST00000453796 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-207ENST00000453796 KSR2Q6VAB6 950 aa18.73■□□□□ 0.59
HSPG2-207ENST00000453796 CCDC191Q8NCU4 936 aa18.73■□□□□ 0.59
HSPG2-207ENST00000453796 PSMD1Q99460 953 aa18.73■□□□□ 0.59
HSPG2-207ENST00000453796 MYH3P11055 1940 aa18.72■□□□□ 0.59
HSPG2-207ENST00000453796 PI4KAP2A4QPH2 592 aa18.72■□□□□ 0.59
HSPG2-207ENST00000453796 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
HSPG2-207ENST00000453796 PI4KAP1Q8N8J0 262 aa18.72■□□□□ 0.59
HSPG2-207ENST00000453796 ZBTB38Q8NAP3 1195 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-207ENST00000453796 MAP3K2Q9Y2U5 619 aa18.72■□□□□ 0.59
HSPG2-207ENST00000453796 COL4A5P29400 1685 aa18.71■□□□□ 0.59
HSPG2-207ENST00000453796 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
HSPG2-207ENST00000453796 MYH16Q9H6N6 1097 aa18.71■□□□□ 0.59
HSPG2-207ENST00000453796 RRAGCQ9HB90 399 aa18.71■□□□□ 0.59
HSPG2-207ENST00000453796 ZNF277Q9NRM2 450 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-207ENST00000453796 IRS4O14654 1257 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-207ENST00000453796 TOMM70O94826 608 aa18.7■□□□□ 0.58
HSPG2-207ENST00000453796 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-207ENST00000453796 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
HSPG2-207ENST00000453796 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
HSPG2-207ENST00000453796 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
HSPG2-207ENST00000453796 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-207ENST00000453796 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
HSPG2-207ENST00000453796 POTECB2RU33 542 aa18.69■□□□□ 0.58
HSPG2-207ENST00000453796 BBOX1O75936 387 aa18.69■□□□□ 0.58
HSPG2-207ENST00000453796 FLIIQ13045 1269 aa18.69■□□□□ 0.58
HSPG2-207ENST00000453796 GRAPQ13588 217 aa18.69■□□□□ 0.58
HSPG2-207ENST00000453796 DDX46Q7L014 1031 aaKnown RBP18.69■□□□□ 0.58
HSPG2-207ENST00000453796 GRAPLQ8TC17 118 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-207ENST00000453796 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-207ENST00000453796 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms