RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 UTP14AQ9BVJ6 771 aaKnown RBP38.84■■■■□ 3.81
CCDC117-206ENST00000453543 LMNB1P20700 586 aa38.83■■■■□ 3.81
CCDC117-206ENST00000453543 ANKRD13DQ6ZTN6 518 aa38.83■■■■□ 3.81
CCDC117-206ENST00000453543 NLRP10Q86W26 655 aa38.83■■■■□ 3.81
CCDC117-206ENST00000453543 CCDC88AQ3V6T2 1871 aa38.83■■■■□ 3.81
CCDC117-206ENST00000453543 C7orf43Q8WVR3 580 aa38.81■■■■□ 3.8
CCDC117-206ENST00000453543 C1QTNF8P60827 252 aa38.8■■■■□ 3.8
CCDC117-206ENST00000453543 C3orf67Q6ZVT6 689 aa38.8■■■■□ 3.8
CCDC117-206ENST00000453543 PHAXQ9H814 394 aaKnown RBP38.8■■■■□ 3.8
CCDC117-206ENST00000453543 ZNF428Q96B54 188 aa38.78■■■■□ 3.8
CCDC117-206ENST00000453543 CCDC30Q5VVM6 783 aa38.77■■■■□ 3.8
CCDC117-206ENST00000453543 WDR63Q8IWG1 891 aa38.77■■■■□ 3.8
CCDC117-206ENST00000453543 TIAM2Q8IVF5 1701 aa38.77■■■■□ 3.8
CCDC117-206ENST00000453543 ALDH1B1P30837 517 aa38.76■■■■□ 3.8
CCDC117-206ENST00000453543 SOGA3Q5TF21 947 aa38.76■■■■□ 3.8
CCDC117-206ENST00000453543 RNF123Q5XPI4 1314 aa38.76■■■■□ 3.8
CCDC117-206ENST00000453543 SYNE4Q8N205 404 aa38.76■■■■□ 3.8
CCDC117-206ENST00000453543 RPGRQ92834 1020 aaKnown RBP38.76■■■■□ 3.8
CCDC117-206ENST00000453543 FANCIQ9NVI1 1328 aa38.76■■■■□ 3.8
CCDC117-206ENST00000453543 OLFM4Q6UX06 510 aa38.75■■■■□ 3.79
CCDC117-206ENST00000453543 ISCA1Q9BUE6 129 aa38.75■■■■□ 3.79
CCDC117-206ENST00000453543 TAOK3Q9H2K8 898 aa38.75■■■■□ 3.79
CCDC117-206ENST00000453543 LTBP3Q9NS15 1303 aa38.74■■■■□ 3.79
CCDC117-206ENST00000453543 ATP5J2-PTCD1G3V325 749 aa38.74■■■■□ 3.79
CCDC117-206ENST00000453543 TWISTNBQ3B726 338 aaPredicted RBP38.74■■■■□ 3.79
CCDC117-206ENST00000453543 SLC10A5Q5PT55 438 aa38.74■■■■□ 3.79
CCDC117-206ENST00000453543 TRMT112Q9UI30 125 aaKnown RBP38.74■■■■□ 3.79
CCDC117-206ENST00000453543 HOXA10P31260 410 aaPredicted RBP38.73■■■■□ 3.79
CCDC117-206ENST00000453543 GOLGA2Q08379 1002 aa38.73■■■■□ 3.79
CCDC117-206ENST00000453543 CCDC93Q567U6 631 aa38.73■■■■□ 3.79
CCDC117-206ENST00000453543 KIF3CO14782 793 aa38.72■■■■□ 3.79
CCDC117-206ENST00000453543 RIC3Q7Z5B4 369 aa38.72■■■■□ 3.79
CCDC117-206ENST00000453543 CHMP4AQ9BY43 222 aa38.72■■■■□ 3.79
CCDC117-206ENST00000453543 NMRK2Q9NPI5 230 aa38.72■■■■□ 3.79
CCDC117-206ENST00000453543 LAMB2P55268 1798 aa38.72■■■■□ 3.79
CCDC117-206ENST00000453543 ZC3H4Q9UPT8 1303 aaKnown RBP38.71■■■■□ 3.79
CCDC117-206ENST00000453543 TCERG1O14776 1098 aaKnown RBP38.71■■■■□ 3.79
CCDC117-206ENST00000453543 HCLS1P14317 486 aaPredicted RBP38.71■■■■□ 3.79
CCDC117-206ENST00000453543 NLRP3Q96P20 1036 aa38.71■■■■□ 3.79
CCDC117-206ENST00000453543 DICER1Q9UPY3 1922 aaKnown RBP38.69■■■■□ 3.78
CCDC117-206ENST00000453543 SH3TC1Q8TE82 1336 aa38.69■■■■□ 3.78
CCDC117-206ENST00000453543 SPINK5Q9NQ38 1064 aaPredicted RBP38.69■■■■□ 3.78
CCDC117-206ENST00000453543 RBM17Q96I25 401 aaKnown RBP38.68■■■■□ 3.78
CCDC117-206ENST00000453543 CRAMP1Q96RY5 1269 aa38.67■■■■□ 3.78
CCDC117-206ENST00000453543 KDM2BQ8NHM5 1336 aa38.66■■■■□ 3.78
CCDC117-206ENST00000453543 DDX60Q8IY21 1712 aaKnown RBP38.66■■■■□ 3.78
CCDC117-206ENST00000453543 STK31Q9BXU1 1019 aa38.65■■■■□ 3.78
CCDC117-206ENST00000453543 SNED1Q8TER0 1413 aa38.64■■■■□ 3.78
CCDC117-206ENST00000453543 TRIM28Q13263 835 aaKnown RBP38.64■■■■□ 3.78
CCDC117-206ENST00000453543 SLC51AQ86UW1 340 aa38.64■■■■□ 3.78
CCDC117-206ENST00000453543 FKBP4Q02790 459 aaKnown RBP eCLIP38.63■■■■□ 3.77
CCDC117-206ENST00000453543 EXOSC9Q06265 439 aaKnown RBP38.63■■■■□ 3.77
CCDC117-206ENST00000453543 FAM89AQ96GI7 184 aa38.63■■■■□ 3.77
CCDC117-206ENST00000453543 MYD88Q99836 296 aa38.63■■■■□ 3.77
CCDC117-206ENST00000453543 DDX58O95786 925 aaKnown RBP38.62■■■■□ 3.77
CCDC117-206ENST00000453543 RTKN2Q8IZC4 609 aa38.62■■■■□ 3.77
CCDC117-206ENST00000453543 PPEF1O14829 653 aaPredicted RBP38.61■■■■□ 3.77
CCDC117-206ENST00000453543 RTL5Q5HYW3 569 aaPredicted RBP38.6■■■■□ 3.77
CCDC117-206ENST00000453543 G2E3Q7L622 706 aa38.6■■■■□ 3.77
CCDC117-206ENST00000453543 ZNF277Q9NRM2 450 aaPredicted RBP38.6■■■■□ 3.77
CCDC117-206ENST00000453543 ABCC4O15439 1325 aa38.6■■■■□ 3.77
CCDC117-206ENST00000453543 GLTPD2A6NH11 291 aa38.59■■■■□ 3.77
CCDC117-206ENST00000453543 ZNF521Q96K83 1311 aa38.59■■■■□ 3.77
CCDC117-206ENST00000453543 VAMP4O75379 141 aa38.58■■■■□ 3.77
CCDC117-206ENST00000453543 SLC4A2P04920 1241 aa38.58■■■■□ 3.77
CCDC117-206ENST00000453543 METTL22Q9BUU2 404 aaPredicted RBP38.58■■■■□ 3.77
CCDC117-206ENST00000453543 MAP3K2Q9Y2U5 619 aa38.58■■■■□ 3.77
CCDC117-206ENST00000453543 MYH16Q9H6N6 1097 aa38.57■■■■□ 3.76
CCDC117-206ENST00000453543 RRAGCQ9HB90 399 aa38.57■■■■□ 3.76
CCDC117-206ENST00000453543 PI4KAP2A4QPH2 592 aa38.56■■■■□ 3.76
CCDC117-206ENST00000453543 CC2D2BQ6DHV5 1058 aa38.56■■■■□ 3.76
CCDC117-206ENST00000453543 PI4KAP1Q8N8J0 262 aa38.56■■■■□ 3.76
CCDC117-206ENST00000453543 KSR2Q6VAB6 950 aa38.55■■■■□ 3.76
CCDC117-206ENST00000453543 TAF1P21675 1872 aa38.54■■■■□ 3.76
CCDC117-206ENST00000453543 CCDC191Q8NCU4 936 aa38.54■■■■□ 3.76
CCDC117-206ENST00000453543 CCER2I3L3R5 266 aa38.53■■■■□ 3.76
CCDC117-206ENST00000453543 IRS4O14654 1257 aaPredicted RBP38.53■■■■□ 3.76
CCDC117-206ENST00000453543 ZBTB38Q8NAP3 1195 aaPredicted RBP38.53■■■■□ 3.76
CCDC117-206ENST00000453543 PSMD1Q99460 953 aa38.53■■■■□ 3.76
CCDC117-206ENST00000453543 DDX46Q7L014 1031 aaKnown RBP38.52■■■■□ 3.76
CCDC117-206ENST00000453543 TOMM70O94826 608 aa38.51■■■■□ 3.76
CCDC117-206ENST00000453543 CWC25Q9NXE8 425 aaPredicted RBP38.51■■■■□ 3.76
CCDC117-206ENST00000453543 ATP6V0A2Q9Y487 856 aa38.51■■■■□ 3.76
CCDC117-206ENST00000453543 IARSP41252 1262 aaKnown RBP38.5■■■■□ 3.75
CCDC117-206ENST00000453543 FLIIQ13045 1269 aa38.5■■■■□ 3.75
CCDC117-206ENST00000453543 CACNA1FO60840 1977 aa38.5■■■■□ 3.75
CCDC117-206ENST00000453543 DPY19L2Q6NUT2 758 aa38.49■■■■□ 3.75
CCDC117-206ENST00000453543 IGKV5-2P06315 115 aa38.48■■■■□ 3.75
CCDC117-206ENST00000453543 GRAPQ13588 217 aa38.48■■■■□ 3.75
CCDC117-206ENST00000453543 SF3B3Q15393 1217 aaKnown RBP38.48■■■■□ 3.75
CCDC117-206ENST00000453543 GRAPLQ8TC17 118 aaPredicted RBP38.48■■■■□ 3.75
CCDC117-206ENST00000453543 JARID2Q92833 1246 aaPredicted RBP38.48■■■■□ 3.75
CCDC117-206ENST00000453543 WDR90Q96KV7 1748 aa38.48■■■■□ 3.75
CCDC117-206ENST00000453543 BBOX1O75936 387 aa38.47■■■■□ 3.75
CCDC117-206ENST00000453543 PCCAP05165 728 aaPredicted RBP38.47■■■■□ 3.75
CCDC117-206ENST00000453543 GRIPAP1Q4V328 841 aa38.47■■■■□ 3.75
CCDC117-206ENST00000453543 C16orf71Q8IYS4 520 aaPredicted RBP38.47■■■■□ 3.75
CCDC117-206ENST00000453543 COL4A1P02462 1669 aa38.46■■■■□ 3.75
CCDC117-206ENST00000453543 COL4A5P29400 1685 aa38.45■■■■□ 3.75
CCDC117-206ENST00000453543 DDNO94850 711 aaPredicted RBP38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms