RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
HERC3-207ENST00000452979 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 NUTM1Q86Y26 1132 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 WBP1LQ9NX94 342 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 COL4A5P29400 1685 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
HERC3-207ENST00000452979 MAP1SQ66K74 1059 aaPredicted RBP15.46■□□□□ 0.07
HERC3-207ENST00000452979 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
HERC3-207ENST00000452979 ZNF34Q8IZ26 560 aa15.46■□□□□ 0.07
HERC3-207ENST00000452979 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
HERC3-207ENST00000452979 CRAMP1Q96RY5 1269 aa15.46■□□□□ 0.07
HERC3-207ENST00000452979 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
HERC3-207ENST00000452979 UBN2Q6ZU65 1347 aa15.45■□□□□ 0.06
HERC3-207ENST00000452979 NEFMP07197 916 aa15.45■□□□□ 0.06
HERC3-207ENST00000452979 EIF6P56537 245 aaKnown RBP15.45■□□□□ 0.06
HERC3-207ENST00000452979 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
HERC3-207ENST00000452979 SUSD4Q5VX71 490 aa15.45■□□□□ 0.06
HERC3-207ENST00000452979 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
HERC3-207ENST00000452979 AIDAQ96BJ3 306 aa15.45■□□□□ 0.06
HERC3-207ENST00000452979 RRP7AQ9Y3A4 280 aaKnown RBP15.45■□□□□ 0.06
HERC3-207ENST00000452979 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
HERC3-207ENST00000452979 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
HERC3-207ENST00000452979 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 NTSR2O95665 410 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 MYL6BP14649 208 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 GPTP24298 496 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 SLC10A5Q5PT55 438 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
HERC3-207ENST00000452979 VPS33BQ9H267 617 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
HERC3-207ENST00000452979 SCNN1DP51172 638 aa15.42■□□□□ 0.06
HERC3-207ENST00000452979 DDX21Q9NR30 783 aaKnown RBP eCLIP15.42■□□□□ 0.06
HERC3-207ENST00000452979 GJA3Q9Y6H8 435 aa15.42■□□□□ 0.06
HERC3-207ENST00000452979 WDR33Q9C0J8 1336 aaKnown RBP15.42■□□□□ 0.06
HERC3-207ENST00000452979 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
HERC3-207ENST00000452979 LMOD1P29536 600 aaPredicted RBP15.41■□□□□ 0.06
HERC3-207ENST00000452979 MAP2K1Q02750 393 aaPredicted RBP15.41■□□□□ 0.06
HERC3-207ENST00000452979 PARP10Q53GL7 1025 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 USP50Q70EL3 339 aaPredicted RBP15.41■□□□□ 0.06
HERC3-207ENST00000452979 LRP10Q7Z4F1 713 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 PPP1R42Q7Z4L9 355 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
HERC3-207ENST00000452979 TRPM7Q96QT4 1865 aa15.41■□□□□ 0.06
HERC3-207ENST00000452979 EPS15P42566 896 aa15.4■□□□□ 0.06
HERC3-207ENST00000452979 LBX1P52954 281 aa15.4■□□□□ 0.06
HERC3-207ENST00000452979 PDIA6Q15084 440 aa15.4■□□□□ 0.06
HERC3-207ENST00000452979 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
HERC3-207ENST00000452979 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
HERC3-207ENST00000452979 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
HERC3-207ENST00000452979 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
HERC3-207ENST00000452979 HSPA8P11142 646 aaKnown RBP15.39■□□□□ 0.05
HERC3-207ENST00000452979 BABAM1Q9NWV8 329 aa15.39■□□□□ 0.05
HERC3-207ENST00000452979 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
HERC3-207ENST00000452979 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
HERC3-207ENST00000452979 CST9Q5W186 159 aa15.38■□□□□ 0.05
HERC3-207ENST00000452979 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
HERC3-207ENST00000452979 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
HERC3-207ENST00000452979 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
HERC3-207ENST00000452979 LAMB2P55268 1798 aa15.37■□□□□ 0.05
HERC3-207ENST00000452979 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
HERC3-207ENST00000452979 BBOX1O75936 387 aa15.37■□□□□ 0.05
HERC3-207ENST00000452979 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
HERC3-207ENST00000452979 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
HERC3-207ENST00000452979 GPRC5DQ9NZD1 345 aa15.37■□□□□ 0.05
HERC3-207ENST00000452979 ZNRF3Q9ULT6 936 aa15.37■□□□□ 0.05
HERC3-207ENST00000452979 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
HERC3-207ENST00000452979 PPIP5K2O43314 1243 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 ECE1P42892 770 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
HERC3-207ENST00000452979 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 SUPT20HQ8NEM7 779 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
HERC3-207ENST00000452979 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
HERC3-207ENST00000452979 CXCL9Q07325 125 aa15.35■□□□□ 0.05
HERC3-207ENST00000452979 AOC3Q16853 763 aa15.35■□□□□ 0.05
HERC3-207ENST00000452979 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
HERC3-207ENST00000452979 TLL2Q9Y6L7 1015 aa15.35■□□□□ 0.05
HERC3-207ENST00000452979 ABCC4O15439 1325 aa15.35■□□□□ 0.05
HERC3-207ENST00000452979 TRAF5O00463 557 aa15.34■□□□□ 0.05
HERC3-207ENST00000452979 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
HERC3-207ENST00000452979 HSP90AB3PQ58FF7 597 aa15.34■□□□□ 0.05
HERC3-207ENST00000452979 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
HERC3-207ENST00000452979 EIF2S2P20042 333 aaKnown RBP15.33■□□□□ 0.04
HERC3-207ENST00000452979 MAP2K2P36507 400 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 RIPK4P57078 832 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 NLRP10Q86W26 655 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 ABHD8Q96I13 439 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
HERC3-207ENST00000452979 ANXA1P04083 346 aa15.32■□□□□ 0.04
HERC3-207ENST00000452979 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
HERC3-207ENST00000452979 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
HERC3-207ENST00000452979 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
HERC3-207ENST00000452979 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
HERC3-207ENST00000452979 MPNDQ8N594 471 aa15.32■□□□□ 0.04
HERC3-207ENST00000452979 ZC3H15Q8WU90 426 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms