RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 HECW1Q76N89 1606 aa11.17□□□□□ -0.62
COPS7B-216ENST00000452375 A6NJY4 79 aa11.17□□□□□ -0.62
COPS7B-216ENST00000452375 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
COPS7B-216ENST00000452375 XP32Q5T750 250 aa11.17□□□□□ -0.62
COPS7B-216ENST00000452375 CHSY3Q70JA7 882 aa11.17□□□□□ -0.62
COPS7B-216ENST00000452375 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
COPS7B-216ENST00000452375 PCBP4P57723 403 aaKnown RBP11.16□□□□□ -0.62
COPS7B-216ENST00000452375 TNP2Q05952 138 aa11.16□□□□□ -0.62
COPS7B-216ENST00000452375 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
COPS7B-216ENST00000452375 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
COPS7B-216ENST00000452375 NUP153P49790 1475 aaKnown RBP11.15□□□□□ -0.62
COPS7B-216ENST00000452375 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
COPS7B-216ENST00000452375 DGKGP49619 791 aa11.15□□□□□ -0.62
COPS7B-216ENST00000452375 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
COPS7B-216ENST00000452375 KLF15Q9UIH9 416 aa11.15□□□□□ -0.62
COPS7B-216ENST00000452375 SETD1BQ9UPS6 1966 aaKnown RBP11.15□□□□□ -0.62
COPS7B-216ENST00000452375 UHRF1BP1Q6BDS2 1440 aa11.15□□□□□ -0.62
COPS7B-216ENST00000452375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
COPS7B-216ENST00000452375 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 ADH6P28332 368 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 PSME1Q06323 249 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-216ENST00000452375 CFAP74Q9C0B2 1584 aa11.14□□□□□ -0.63
COPS7B-216ENST00000452375 PIK3R2O00459 728 aa11.13□□□□□ -0.63
COPS7B-216ENST00000452375 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
COPS7B-216ENST00000452375 SKIP12755 728 aa11.13□□□□□ -0.63
COPS7B-216ENST00000452375 ZNF295-AS1Q8N0V1 137 aa11.13□□□□□ -0.63
COPS7B-216ENST00000452375 PCDHGA11Q9Y5H2 935 aa11.13□□□□□ -0.63
COPS7B-216ENST00000452375 ATP10AO60312 1499 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 TXLNAP40222 546 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 CHRNA4P43681 627 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 MCM6Q14566 821 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 MTFR1Q15390 333 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 EML3Q32P44 896 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 CD163Q86VB7 1156 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-216ENST00000452375 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
COPS7B-216ENST00000452375 SLC4A9Q96Q91 983 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
COPS7B-216ENST00000452375 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
COPS7B-216ENST00000452375 ZDHHC3Q9NYG2 299 aa11.11□□□□□ -0.63
COPS7B-216ENST00000452375 C9orf84Q5VXU9 1444 aa11.1□□□□□ -0.63
COPS7B-216ENST00000452375 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
COPS7B-216ENST00000452375 SOX11P35716 441 aa11.1□□□□□ -0.63
COPS7B-216ENST00000452375 GTF2IP78347 998 aa11.1□□□□□ -0.63
COPS7B-216ENST00000452375 TBCELQ5QJ74 424 aa11.1□□□□□ -0.63
COPS7B-216ENST00000452375 NOP53Q9NZM5 478 aaKnown RBP11.1□□□□□ -0.63
COPS7B-216ENST00000452375 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 FAM182BQ5T319 152 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 DEPDC4Q8N2C3 294 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 MARK1Q9P0L2 795 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
COPS7B-216ENST00000452375 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
COPS7B-216ENST00000452375 FAM157BP0CG42 384 aa11.08□□□□□ -0.64
COPS7B-216ENST00000452375 ZNF358Q9NW07 568 aa11.08□□□□□ -0.64
COPS7B-216ENST00000452375 C3P01024 1663 aa11.08□□□□□ -0.64
COPS7B-216ENST00000452375 BACH1O14867 736 aa11.07□□□□□ -0.64
COPS7B-216ENST00000452375 NCOA4Q13772 614 aa11.07□□□□□ -0.64
COPS7B-216ENST00000452375 ZNF468Q5VIY5 522 aaPredicted RBP11.07□□□□□ -0.64
COPS7B-216ENST00000452375 LRRC69Q6ZNQ3 347 aa11.07□□□□□ -0.64
COPS7B-216ENST00000452375 ZDHHC1Q8WTX9 485 aa11.07□□□□□ -0.64
COPS7B-216ENST00000452375 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
COPS7B-216ENST00000452375 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
COPS7B-216ENST00000452375 L3MBTL2Q969R5 705 aa11.06□□□□□ -0.64
COPS7B-216ENST00000452375 TRIM11Q96F44 468 aa11.06□□□□□ -0.64
COPS7B-216ENST00000452375 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
COPS7B-216ENST00000452375 ZNF232Q9UNY5 417 aa11.06□□□□□ -0.64
COPS7B-216ENST00000452375 ZNF335Q9H4Z2 1342 aaPredicted RBP11.06□□□□□ -0.64
COPS7B-216ENST00000452375 PLCH2O75038 1416 aa11.05□□□□□ -0.64
COPS7B-216ENST00000452375 DOC2BQ14184 412 aa11.05□□□□□ -0.64
COPS7B-216ENST00000452375 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
COPS7B-216ENST00000452375 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
COPS7B-216ENST00000452375 SCHIP1Q9P0W5 487 aaPredicted RBP11.05□□□□□ -0.64
COPS7B-216ENST00000452375 SYT9Q86SS6 491 aa11.04□□□□□ -0.64
COPS7B-216ENST00000452375 NEUROD4Q9HD90 331 aa11.04□□□□□ -0.64
COPS7B-216ENST00000452375 TRAPPC8Q9Y2L5 1435 aa11.03□□□□□ -0.64
COPS7B-216ENST00000452375 NOS2P35228 1153 aa11.03□□□□□ -0.64
COPS7B-216ENST00000452375 SH3PXD2AQ5TCZ1 1133 aa11.03□□□□□ -0.64
COPS7B-216ENST00000452375 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
COPS7B-216ENST00000452375 POM121Q96HA1 1249 aa11.03□□□□□ -0.64
COPS7B-216ENST00000452375 EFSO43281 561 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 HSPA1LP34931 641 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 Q8N3U1 123 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 ALG2Q9H553 416 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
COPS7B-216ENST00000452375 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
COPS7B-216ENST00000452375 AFAP1Q8N556 730 aa11.01□□□□□ -0.65
COPS7B-216ENST00000452375 DIP2CQ9Y2E4 1556 aa11.01□□□□□ -0.65
COPS7B-216ENST00000452375 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
COPS7B-216ENST00000452375 KDM5CP41229 1560 aa11□□□□□ -0.65
COPS7B-216ENST00000452375 ELOA3CA0A087WX78 387 aaPredicted RBP11□□□□□ -0.65
COPS7B-216ENST00000452375 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
COPS7B-216ENST00000452375 ALAS2P22557 587 aa11□□□□□ -0.65
COPS7B-216ENST00000452375 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms