RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 PARP10Q53GL7 1025 aa33.68■■■□□ 2.98
RETREG2-207ENST00000452293 C3orf67Q6ZVT6 689 aa33.68■■■□□ 2.98
RETREG2-207ENST00000452293 PPP1R42Q7Z4L9 355 aa33.68■■■□□ 2.98
RETREG2-207ENST00000452293 SYNE4Q8N205 404 aa33.68■■■□□ 2.98
RETREG2-207ENST00000452293 NPR1P16066 1061 aa33.67■■■□□ 2.98
RETREG2-207ENST00000452293 NLRP10Q86W26 655 aa33.67■■■□□ 2.98
RETREG2-207ENST00000452293 UTP14AQ9BVJ6 771 aaKnown RBP33.67■■■□□ 2.98
RETREG2-207ENST00000452293 ATP5J2-PTCD1G3V325 749 aa33.66■■■□□ 2.98
RETREG2-207ENST00000452293 NFKBIEO00221 500 aa33.66■■■□□ 2.98
RETREG2-207ENST00000452293 TWISTNBQ3B726 338 aaPredicted RBP33.66■■■□□ 2.98
RETREG2-207ENST00000452293 HSP90AB3PQ58FF7 597 aa33.66■■■□□ 2.98
RETREG2-207ENST00000452293 TIAM2Q8IVF5 1701 aa33.66■■■□□ 2.98
RETREG2-207ENST00000452293 WDR63Q8IWG1 891 aa33.66■■■□□ 2.98
RETREG2-207ENST00000452293 TAF1P21675 1872 aa33.65■■■□□ 2.98
RETREG2-207ENST00000452293 CCDC30Q5VVM6 783 aa33.65■■■□□ 2.98
RETREG2-207ENST00000452293 OLFM4Q6UX06 510 aa33.65■■■□□ 2.98
RETREG2-207ENST00000452293 DDX60Q8IY21 1712 aaKnown RBP33.64■■■□□ 2.98
RETREG2-207ENST00000452293 DICER1Q9UPY3 1922 aaKnown RBP33.63■■■□□ 2.97
RETREG2-207ENST00000452293 GPBP1L1Q9HC44 474 aaPredicted RBP33.63■■■□□ 2.97
RETREG2-207ENST00000452293 EXOSC9Q06265 439 aaKnown RBP33.61■■■□□ 2.97
RETREG2-207ENST00000452293 GOLGA2Q08379 1002 aa33.61■■■□□ 2.97
RETREG2-207ENST00000452293 RIC3Q7Z5B4 369 aa33.61■■■□□ 2.97
RETREG2-207ENST00000452293 SLC51AQ86UW1 340 aa33.61■■■□□ 2.97
RETREG2-207ENST00000452293 TRMT112Q9UI30 125 aaKnown RBP33.61■■■□□ 2.97
RETREG2-207ENST00000452293 RIC1Q4ADV7 1423 aa33.61■■■□□ 2.97
RETREG2-207ENST00000452293 HCLS1P14317 486 aaPredicted RBP33.6■■■□□ 2.97
RETREG2-207ENST00000452293 CRY2Q49AN0 593 aa33.6■■■□□ 2.97
RETREG2-207ENST00000452293 CACNA1FO60840 1977 aa33.6■■■□□ 2.97
RETREG2-207ENST00000452293 RPGRQ92834 1020 aaKnown RBP33.59■■■□□ 2.97
RETREG2-207ENST00000452293 ISCA1Q9BUE6 129 aa33.59■■■□□ 2.97
RETREG2-207ENST00000452293 RTL5Q5HYW3 569 aaPredicted RBP33.57■■■□□ 2.96
RETREG2-207ENST00000452293 G2E3Q7L622 706 aa33.57■■■□□ 2.96
RETREG2-207ENST00000452293 C7orf43Q8WVR3 580 aa33.57■■■□□ 2.96
RETREG2-207ENST00000452293 MYD88Q99836 296 aa33.57■■■□□ 2.96
RETREG2-207ENST00000452293 LMNB1P20700 586 aa33.56■■■□□ 2.96
RETREG2-207ENST00000452293 STK31Q9BXU1 1019 aa33.56■■■□□ 2.96
RETREG2-207ENST00000452293 SH3TC1Q8TE82 1336 aa33.54■■■□□ 2.96
RETREG2-207ENST00000452293 SLC10A5Q5PT55 438 aa33.54■■■□□ 2.96
RETREG2-207ENST00000452293 NLRP3Q96P20 1036 aa33.54■■■□□ 2.96
RETREG2-207ENST00000452293 ZNF521Q96K83 1311 aa33.53■■■□□ 2.96
RETREG2-207ENST00000452293 CCER2I3L3R5 266 aa33.53■■■□□ 2.96
RETREG2-207ENST00000452293 ALDH1B1P30837 517 aa33.53■■■□□ 2.96
RETREG2-207ENST00000452293 FAM89AQ96GI7 184 aa33.53■■■□□ 2.96
RETREG2-207ENST00000452293 TAOK3Q9H2K8 898 aa33.53■■■□□ 2.96
RETREG2-207ENST00000452293 VAMP4O75379 141 aa33.52■■■□□ 2.96
RETREG2-207ENST00000452293 SLC4A2P04920 1241 aa33.52■■■□□ 2.96
RETREG2-207ENST00000452293 CCDC93Q567U6 631 aa33.52■■■□□ 2.96
RETREG2-207ENST00000452293 RBM17Q96I25 401 aaKnown RBP33.51■■■□□ 2.95
RETREG2-207ENST00000452293 NMRK2Q9NPI5 230 aa33.51■■■□□ 2.95
RETREG2-207ENST00000452293 MAP3K2Q9Y2U5 619 aa33.51■■■□□ 2.95
RETREG2-207ENST00000452293 RNF123Q5XPI4 1314 aa33.51■■■□□ 2.95
RETREG2-207ENST00000452293 HOXA10P31260 410 aaPredicted RBP33.5■■■□□ 2.95
RETREG2-207ENST00000452293 JARID2Q92833 1246 aaPredicted RBP33.5■■■□□ 2.95
RETREG2-207ENST00000452293 CHMP4AQ9BY43 222 aa33.5■■■□□ 2.95
RETREG2-207ENST00000452293 MYH16Q9H6N6 1097 aa33.5■■■□□ 2.95
RETREG2-207ENST00000452293 DDX58O95786 925 aaKnown RBP33.49■■■□□ 2.95
RETREG2-207ENST00000452293 SOGA3Q5TF21 947 aa33.49■■■□□ 2.95
RETREG2-207ENST00000452293 DIEXFQ68CQ4 756 aaKnown RBP33.49■■■□□ 2.95
RETREG2-207ENST00000452293 PI4KAP2A4QPH2 592 aa33.48■■■□□ 2.95
RETREG2-207ENST00000452293 PI4KAP1Q8N8J0 262 aa33.48■■■□□ 2.95
RETREG2-207ENST00000452293 MIER1Q8N108 512 aa33.47■■■□□ 2.95
RETREG2-207ENST00000452293 CRAMP1Q96RY5 1269 aa33.47■■■□□ 2.95
RETREG2-207ENST00000452293 METTL22Q9BUU2 404 aaPredicted RBP33.47■■■□□ 2.95
RETREG2-207ENST00000452293 ABCC4O15439 1325 aa33.47■■■□□ 2.95
RETREG2-207ENST00000452293 LTBP3Q9NS15 1303 aa33.47■■■□□ 2.95
RETREG2-207ENST00000452293 COL4A1P02462 1669 aa33.46■■■□□ 2.95
RETREG2-207ENST00000452293 KIF3CO14782 793 aa33.46■■■□□ 2.95
RETREG2-207ENST00000452293 PPEF1O14829 653 aaPredicted RBP33.46■■■□□ 2.95
RETREG2-207ENST00000452293 C1QTNF8P60827 252 aa33.46■■■□□ 2.95
RETREG2-207ENST00000452293 TRIM28Q13263 835 aaKnown RBP33.45■■■□□ 2.95
RETREG2-207ENST00000452293 KSR2Q6VAB6 950 aa33.45■■■□□ 2.95
RETREG2-207ENST00000452293 ZNF277Q9NRM2 450 aaPredicted RBP33.45■■■□□ 2.95
RETREG2-207ENST00000452293 FKBP4Q02790 459 aaKnown RBP eCLIP33.44■■■□□ 2.94
RETREG2-207ENST00000452293 SNED1Q8TER0 1413 aa33.44■■■□□ 2.94
RETREG2-207ENST00000452293 FLIIQ13045 1269 aa33.43■■■□□ 2.94
RETREG2-207ENST00000452293 IRS4O14654 1257 aaPredicted RBP33.42■■■□□ 2.94
RETREG2-207ENST00000452293 IGKV5-2P06315 115 aa33.41■■■□□ 2.94
RETREG2-207ENST00000452293 MYH3P11055 1940 aa33.4■■■□□ 2.94
RETREG2-207ENST00000452293 FKBP5Q13451 457 aaPredicted RBP33.4■■■□□ 2.94
RETREG2-207ENST00000452293 CWF19L2Q2TBE0 894 aaKnown RBP33.4■■■□□ 2.94
RETREG2-207ENST00000452293 RTKN2Q8IZC4 609 aa33.4■■■□□ 2.94
RETREG2-207ENST00000452293 ZBTB38Q8NAP3 1195 aaPredicted RBP33.4■■■□□ 2.94
RETREG2-207ENST00000452293 CCDC191Q8NCU4 936 aa33.4■■■□□ 2.94
RETREG2-207ENST00000452293 CDCA7LQ96GN5 454 aa33.4■■■□□ 2.94
RETREG2-207ENST00000452293 CWC25Q9NXE8 425 aaPredicted RBP33.4■■■□□ 2.94
RETREG2-207ENST00000452293 KDM2BQ8NHM5 1336 aa33.39■■■□□ 2.94
RETREG2-207ENST00000452293 DDX46Q7L014 1031 aaKnown RBP33.39■■■□□ 2.94
RETREG2-207ENST00000452293 RRAGCQ9HB90 399 aa33.39■■■□□ 2.94
RETREG2-207ENST00000452293 ZC3H4Q9UPT8 1303 aaKnown RBP33.37■■■□□ 2.93
RETREG2-207ENST00000452293 GLTPD2A6NH11 291 aa33.36■■■□□ 2.93
RETREG2-207ENST00000452293 PCCAP05165 728 aaPredicted RBP33.36■■■□□ 2.93
RETREG2-207ENST00000452293 COL4A5P29400 1685 aa33.36■■■□□ 2.93
RETREG2-207ENST00000452293 SPEF2Q9C093 1822 aa33.35■■■□□ 2.93
RETREG2-207ENST00000452293 NEXNQ0ZGT2 675 aa33.35■■■□□ 2.93
RETREG2-207ENST00000452293 GRAPQ13588 217 aa33.35■■■□□ 2.93
RETREG2-207ENST00000452293 GRAPLQ8TC17 118 aaPredicted RBP33.35■■■□□ 2.93
RETREG2-207ENST00000452293 CCDC85AQ96PX6 553 aaPredicted RBP33.35■■■□□ 2.93
RETREG2-207ENST00000452293 SLFN5Q08AF3 891 aa33.34■■■□□ 2.93
RETREG2-207ENST00000452293 ATP6V0A2Q9Y487 856 aa33.34■■■□□ 2.93
RETREG2-207ENST00000452293 NEURL1BA8MQ27 555 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms