RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SATB1-208ENST00000452260 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
SATB1-208ENST00000452260 ERVV-1B6SEH8 477 aa13.07□□□□□ -0.32
SATB1-208ENST00000452260 NEFMP07197 916 aa13.07□□□□□ -0.32
SATB1-208ENST00000452260 LBX1P52954 281 aa13.07□□□□□ -0.32
SATB1-208ENST00000452260 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
SATB1-208ENST00000452260 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
SATB1-208ENST00000452260 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
SATB1-208ENST00000452260 NGEFQ8N5V2 710 aa13.06□□□□□ -0.32
SATB1-208ENST00000452260 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
SATB1-208ENST00000452260 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
SATB1-208ENST00000452260 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
SATB1-208ENST00000452260 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
SATB1-208ENST00000452260 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
SATB1-208ENST00000452260 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
SATB1-208ENST00000452260 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
SATB1-208ENST00000452260 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
SATB1-208ENST00000452260 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
SATB1-208ENST00000452260 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
SATB1-208ENST00000452260 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
SATB1-208ENST00000452260 ECE1P42892 770 aa13.04□□□□□ -0.32
SATB1-208ENST00000452260 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
SATB1-208ENST00000452260 BEGAINQ9BUH8 593 aa13.04□□□□□ -0.32
SATB1-208ENST00000452260 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
SATB1-208ENST00000452260 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
SATB1-208ENST00000452260 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
SATB1-208ENST00000452260 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
SATB1-208ENST00000452260 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
SATB1-208ENST00000452260 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
SATB1-208ENST00000452260 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
SATB1-208ENST00000452260 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.32
SATB1-208ENST00000452260 GPTP24298 496 aa13.02□□□□□ -0.33
SATB1-208ENST00000452260 USP50Q70EL3 339 aaPredicted RBP13.02□□□□□ -0.33
SATB1-208ENST00000452260 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
SATB1-208ENST00000452260 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
SATB1-208ENST00000452260 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
SATB1-208ENST00000452260 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
SATB1-208ENST00000452260 MYL6BP14649 208 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 EPS15P42566 896 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 SCNN1DP51172 638 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 SUSD4Q5VX71 490 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 TTLL7Q6ZT98 887 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 ABHD8Q96I13 439 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
SATB1-208ENST00000452260 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
SATB1-208ENST00000452260 PPIP5K2O43314 1243 aa13□□□□□ -0.33
SATB1-208ENST00000452260 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
SATB1-208ENST00000452260 PARP10Q53GL7 1025 aa13□□□□□ -0.33
SATB1-208ENST00000452260 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
SATB1-208ENST00000452260 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 GRM1Q13255 1194 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 ZNF34Q8IZ26 560 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
SATB1-208ENST00000452260 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
SATB1-208ENST00000452260 ADARB2Q9NS39 739 aaKnown RBP12.99□□□□□ -0.33
SATB1-208ENST00000452260 NTSR2O95665 410 aa12.98□□□□□ -0.33
SATB1-208ENST00000452260 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
SATB1-208ENST00000452260 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
SATB1-208ENST00000452260 MAP2K2P36507 400 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
SATB1-208ENST00000452260 AOC3Q16853 763 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 CST9Q5W186 159 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
SATB1-208ENST00000452260 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
SATB1-208ENST00000452260 TRAF5O00463 557 aa12.96□□□□□ -0.33
SATB1-208ENST00000452260 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
SATB1-208ENST00000452260 BBOX1O75936 387 aa12.96□□□□□ -0.33
SATB1-208ENST00000452260 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
SATB1-208ENST00000452260 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
SATB1-208ENST00000452260 COL4A5P29400 1685 aa12.96□□□□□ -0.34
SATB1-208ENST00000452260 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 CCDC85CA6NKD9 419 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 CA12O43570 354 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
SATB1-208ENST00000452260 CXCL9Q07325 125 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
SATB1-208ENST00000452260 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
SATB1-208ENST00000452260 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 NUP98P52948 1817 aa12.95□□□□□ -0.34
SATB1-208ENST00000452260 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
SATB1-208ENST00000452260 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
SATB1-208ENST00000452260 TNIP1Q15025 636 aa12.94□□□□□ -0.34
SATB1-208ENST00000452260 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
SATB1-208ENST00000452260 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
SATB1-208ENST00000452260 SAPCD2Q86UD0 394 aa12.94□□□□□ -0.34
SATB1-208ENST00000452260 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms