RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 UTP14AQ9BVJ6 771 aaKnown RBP28.08■■■□□ 2.09
C9orf3-208ENST00000451893 APAF1O14727 1248 aa28.07■■■□□ 2.08
C9orf3-208ENST00000451893 FKBP4Q02790 459 aaKnown RBP eCLIP28.07■■■□□ 2.08
C9orf3-208ENST00000451893 KRT24Q2M2I5 525 aa28.07■■■□□ 2.08
C9orf3-208ENST00000451893 CFAP44Q96MT7 982 aa28.07■■■□□ 2.08
C9orf3-208ENST00000451893 DDX21Q9NR30 783 aaKnown RBP eCLIP28.07■■■□□ 2.08
C9orf3-208ENST00000451893 NLRP3Q96P20 1036 aa28.06■■■□□ 2.08
C9orf3-208ENST00000451893 ANKRD36CQ5JPF3 1778 aa28.06■■■□□ 2.08
C9orf3-208ENST00000451893 NTSR2O95665 410 aa28.05■■■□□ 2.08
C9orf3-208ENST00000451893 CHPF2Q9P2E5 772 aa28.05■■■□□ 2.08
C9orf3-208ENST00000451893 HOXB7P09629 217 aa28.04■■■□□ 2.08
C9orf3-208ENST00000451893 ZNF277Q9NRM2 450 aaPredicted RBP28.04■■■□□ 2.08
C9orf3-208ENST00000451893 CRY2Q49AN0 593 aa28.03■■■□□ 2.08
C9orf3-208ENST00000451893 C7orf43Q8WVR3 580 aa28.03■■■□□ 2.08
C9orf3-208ENST00000451893 DBF4Q9UBU7 674 aaPredicted RBP28.03■■■□□ 2.08
C9orf3-208ENST00000451893 RIC1Q4ADV7 1423 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 WDR90Q96KV7 1748 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 TCERG1O14776 1098 aaKnown RBP28.02■■■□□ 2.08
C9orf3-208ENST00000451893 GNAI1P63096 354 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 OLFM4Q6UX06 510 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 LRP10Q7Z4F1 713 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 MBIPQ9NS73 344 aa28.02■■■□□ 2.08
C9orf3-208ENST00000451893 DUSP27Q5VZP5 1158 aa28.01■■■□□ 2.07
C9orf3-208ENST00000451893 CC2D2BQ6DHV5 1058 aa28.01■■■□□ 2.07
C9orf3-208ENST00000451893 RNF123Q5XPI4 1314 aa28■■■□□ 2.07
C9orf3-208ENST00000451893 PPEF1O14829 653 aaPredicted RBP28■■■□□ 2.07
C9orf3-208ENST00000451893 DDNO94850 711 aaPredicted RBP28■■■□□ 2.07
C9orf3-208ENST00000451893 SYNE4Q8N205 404 aa28■■■□□ 2.07
C9orf3-208ENST00000451893 IFT57Q9NWB7 429 aa28■■■□□ 2.07
C9orf3-208ENST00000451893 TRMT112Q9UI30 125 aaKnown RBP28■■■□□ 2.07
C9orf3-208ENST00000451893 JDP2Q8WYK2 163 aa27.99■■■□□ 2.07
C9orf3-208ENST00000451893 HYPKQ9NX55 129 aa27.99■■■□□ 2.07
C9orf3-208ENST00000451893 IARSP41252 1262 aaKnown RBP27.98■■■□□ 2.07
C9orf3-208ENST00000451893 TCIRG1Q13488 830 aa27.98■■■□□ 2.07
C9orf3-208ENST00000451893 CRAMP1Q96RY5 1269 aa27.98■■■□□ 2.07
C9orf3-208ENST00000451893 IQCA1LA6NCM1 817 aa27.97■■■□□ 2.07
C9orf3-208ENST00000451893 HOXA10P31260 410 aaPredicted RBP27.97■■■□□ 2.07
C9orf3-208ENST00000451893 GRIPAP1Q4V328 841 aa27.97■■■□□ 2.07
C9orf3-208ENST00000451893 NLRP10Q86W26 655 aa27.97■■■□□ 2.07
C9orf3-208ENST00000451893 SH3TC1Q8TE82 1336 aa27.96■■■□□ 2.07
C9orf3-208ENST00000451893 ANKRD13DQ6ZTN6 518 aa27.96■■■□□ 2.07
C9orf3-208ENST00000451893 PLBD2Q8NHP8 589 aa27.96■■■□□ 2.07
C9orf3-208ENST00000451893 ELL2O00472 640 aaPredicted RBP27.95■■■□□ 2.06
C9orf3-208ENST00000451893 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
C9orf3-208ENST00000451893 PSMD1Q99460 953 aa27.95■■■□□ 2.06
C9orf3-208ENST00000451893 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
C9orf3-208ENST00000451893 HCLS1P14317 486 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-208ENST00000451893 DDX46Q7L014 1031 aaKnown RBP27.93■■■□□ 2.06
C9orf3-208ENST00000451893 RIC3Q7Z5B4 369 aa27.93■■■□□ 2.06
C9orf3-208ENST00000451893 ZNF428Q96B54 188 aa27.93■■■□□ 2.06
C9orf3-208ENST00000451893 MRS2Q9HD23 443 aa27.93■■■□□ 2.06
C9orf3-208ENST00000451893 EIF6P56537 245 aaKnown RBP27.92■■■□□ 2.06
C9orf3-208ENST00000451893 SLC10A5Q5PT55 438 aa27.92■■■□□ 2.06
C9orf3-208ENST00000451893 C3orf67Q6ZVT6 689 aa27.92■■■□□ 2.06
C9orf3-208ENST00000451893 LARGE2Q8N3Y3 721 aa27.92■■■□□ 2.06
C9orf3-208ENST00000451893 CEP350Q5VT06 3117 aa27.92■■■□□ 2.06
C9orf3-208ENST00000451893 SCN4AP35499 1836 aa27.91■■■□□ 2.06
C9orf3-208ENST00000451893 HTRA3P83110 453 aa27.91■■■□□ 2.06
C9orf3-208ENST00000451893 LAMB2P55268 1798 aa27.91■■■□□ 2.06
C9orf3-208ENST00000451893 ZNF541Q9H0D2 1346 aa27.91■■■□□ 2.06
C9orf3-208ENST00000451893 POTECB2RU33 542 aa27.9■■■□□ 2.06
C9orf3-208ENST00000451893 ZNF853P0CG23 659 aa27.9■■■□□ 2.06
C9orf3-208ENST00000451893 ABCC4O15439 1325 aa27.9■■■□□ 2.06
C9orf3-208ENST00000451893 ATP5J2-PTCD1G3V325 749 aa27.89■■■□□ 2.06
C9orf3-208ENST00000451893 EAPPQ56P03 285 aaPredicted RBP27.89■■■□□ 2.06
C9orf3-208ENST00000451893 CHADLQ6NUI6 762 aa27.88■■■□□ 2.05
C9orf3-208ENST00000451893 NIM1KQ8IY84 436 aa27.88■■■□□ 2.05
C9orf3-208ENST00000451893 HACL1Q9UJ83 578 aa27.88■■■□□ 2.05
C9orf3-208ENST00000451893 GJA3Q9Y6H8 435 aa27.88■■■□□ 2.05
C9orf3-208ENST00000451893 CCDC184Q52MB2 194 aa27.87■■■□□ 2.05
C9orf3-208ENST00000451893 CCDC30Q5VVM6 783 aa27.87■■■□□ 2.05
C9orf3-208ENST00000451893 SUPT20HQ8NEM7 779 aa27.87■■■□□ 2.05
C9orf3-208ENST00000451893 CLEC11AQ9Y240 323 aa27.87■■■□□ 2.05
C9orf3-208ENST00000451893 ATP6V0A2Q9Y487 856 aa27.87■■■□□ 2.05
C9orf3-208ENST00000451893 PPIP5K2O43314 1243 aa27.86■■■□□ 2.05
C9orf3-208ENST00000451893 BBOX1O75936 387 aa27.86■■■□□ 2.05
C9orf3-208ENST00000451893 DDX58O95786 925 aaKnown RBP27.86■■■□□ 2.05
C9orf3-208ENST00000451893 RTL5Q5HYW3 569 aaPredicted RBP27.86■■■□□ 2.05
C9orf3-208ENST00000451893 L3MBTL3Q96JM7 780 aaPredicted RBP27.86■■■□□ 2.05
C9orf3-208ENST00000451893 FZD9O00144 591 aa27.85■■■□□ 2.05
C9orf3-208ENST00000451893 LMOD1P29536 600 aaPredicted RBP27.85■■■□□ 2.05
C9orf3-208ENST00000451893 DPP8Q6V1X1 898 aaPredicted RBP27.85■■■□□ 2.05
C9orf3-208ENST00000451893 GPC2Q8N158 579 aa27.85■■■□□ 2.05
C9orf3-208ENST00000451893 KLRG1Q96E93 195 aa27.85■■■□□ 2.05
C9orf3-208ENST00000451893 FAM89AQ96GI7 184 aa27.85■■■□□ 2.05
C9orf3-208ENST00000451893 GRAPQ13588 217 aa27.84■■■□□ 2.05
C9orf3-208ENST00000451893 GRAPLQ8TC17 118 aaPredicted RBP27.84■■■□□ 2.05
C9orf3-208ENST00000451893 STK31Q9BXU1 1019 aa27.84■■■□□ 2.05
C9orf3-208ENST00000451893 TAF1DQ9H5J8 278 aaPredicted RBP27.84■■■□□ 2.05
C9orf3-208ENST00000451893 HSP90B1P14625 803 aaKnown RBP27.83■■■□□ 2.05
C9orf3-208ENST00000451893 LDHDQ86WU2 507 aa27.83■■■□□ 2.05
C9orf3-208ENST00000451893 MPNDQ8N594 471 aa27.83■■■□□ 2.05
C9orf3-208ENST00000451893 C8orf58Q8NAV2 365 aa27.83■■■□□ 2.05
C9orf3-208ENST00000451893 ISCA1Q9BUE6 129 aa27.83■■■□□ 2.05
C9orf3-208ENST00000451893 PHAXQ9H814 394 aaKnown RBP27.83■■■□□ 2.05
C9orf3-208ENST00000451893 EPHX2P34913 555 aa27.82■■■□□ 2.04
C9orf3-208ENST00000451893 DNAJC5GQ8N7S2 189 aa27.82■■■□□ 2.04
C9orf3-208ENST00000451893 MYD88Q99836 296 aa27.82■■■□□ 2.04
C9orf3-208ENST00000451893 DDX60Q8IY21 1712 aaKnown RBP27.81■■■□□ 2.04
C9orf3-208ENST00000451893 AOC3Q16853 763 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms