RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 ECHDC1Q9NTX5 307 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 TLR7Q9NYK1 1049 aaKnown RBP13.78□□□□□ -0.2
TNXB-203ENST00000451343 MTMR6Q9Y217 621 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 KCNJ4P48050 445 aa13.77□□□□□ -0.2
TNXB-203ENST00000451343 ME3Q16798 604 aa13.77□□□□□ -0.2
TNXB-203ENST00000451343 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.2
TNXB-203ENST00000451343 NPHP4O75161 1426 aaPredicted RBP13.77□□□□□ -0.2
TNXB-203ENST00000451343 UBE2HP62256 183 aa13.77□□□□□ -0.21
TNXB-203ENST00000451343 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.21
TNXB-203ENST00000451343 KIAA2012Q0VF49 1180 aa13.77□□□□□ -0.21
TNXB-203ENST00000451343 MCM5P33992 734 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
TNXB-203ENST00000451343 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
TNXB-203ENST00000451343 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
TNXB-203ENST00000451343 AP5Z1O43299 807 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
TNXB-203ENST00000451343 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
TNXB-203ENST00000451343 HSP90AB4PQ58FF6 505 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 SUCLG2Q96I99 432 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 CYP46A1Q9Y6A2 500 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
TNXB-203ENST00000451343 EPB41L2O43491 1005 aaKnown RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 EAF2Q96CJ1 260 aaPredicted RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 BOLA2Q9H3K6 86 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 PXDNQ92626 1479 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 SASH1O94885 1247 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 RUFY2Q8WXA3 655 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 KAZALD1Q96I82 304 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
TNXB-203ENST00000451343 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
TNXB-203ENST00000451343 A0A0D9SFI3 127 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 TERF1P54274 439 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 NDUFB9Q9Y6M9 179 aa13.74□□□□□ -0.21
TNXB-203ENST00000451343 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
TNXB-203ENST00000451343 GIGYF1O75420 1035 aaPredicted RBP13.73□□□□□ -0.21
TNXB-203ENST00000451343 LTN1O94822 1766 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 STK3Q13188 491 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 CAMK4Q16566 473 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 RGS22Q8NE09 1264 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 CHGBP05060 677 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 MTX1Q13505 466 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 ATF3P18847 181 aa13.73□□□□□ -0.21
TNXB-203ENST00000451343 PIP4K2AP48426 406 aaPredicted RBP13.73□□□□□ -0.21
TNXB-203ENST00000451343 HOXB7P09629 217 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
TNXB-203ENST00000451343 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 EVI5LQ96CN4 794 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 GPATCH3Q96I76 525 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 FUCA2Q9BTY2 467 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 IGSF3O75054 1194 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
TNXB-203ENST00000451343 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
TNXB-203ENST00000451343 FSD1Q9BTV5 496 aa13.72□□□□□ -0.21
TNXB-203ENST00000451343 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
TNXB-203ENST00000451343 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
TNXB-203ENST00000451343 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.21
TNXB-203ENST00000451343 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
TNXB-203ENST00000451343 GRM8O00222 908 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 SLC27A2O14975 620 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 KDM4AO75164 1064 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 MYL6BP14649 208 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 LIG1P18858 919 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
TNXB-203ENST00000451343 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
TNXB-203ENST00000451343 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNXB-203ENST00000451343 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNXB-203ENST00000451343 CHD2O14647 1828 aaKnown RBP13.7□□□□□ -0.22
TNXB-203ENST00000451343 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 PIBF1Q8WXW3 757 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 ALDH1L1O75891 902 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 EPHA10Q5JZY3 1008 aa13.7□□□□□ -0.22
TNXB-203ENST00000451343 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms