RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 IBTKQ9P2D0 1353 aaPredicted RBP35.51■■■■□ 3.27
USP42-204ENST00000451154 HOXA10P31260 410 aaPredicted RBP35.5■■■■□ 3.27
USP42-204ENST00000451154 PCNTO95613 3336 aa35.5■■■■□ 3.27
USP42-204ENST00000451154 POTEIP0CG38 1075 aa35.49■■■■□ 3.27
USP42-204ENST00000451154 POTEJP0CG39 1038 aa35.49■■■■□ 3.27
USP42-204ENST00000451154 AIMP1Q12904 312 aaKnown RBP35.49■■■■□ 3.27
USP42-204ENST00000451154 C3orf67Q6ZVT6 689 aa35.49■■■■□ 3.27
USP42-204ENST00000451154 COPS6Q7L5N1 327 aa35.49■■■■□ 3.27
USP42-204ENST00000451154 PARP10Q53GL7 1025 aa35.48■■■■□ 3.27
USP42-204ENST00000451154 IARSP41252 1262 aaKnown RBP35.47■■■■□ 3.27
USP42-204ENST00000451154 XAGE3Q8WTP9 111 aa35.47■■■■□ 3.27
USP42-204ENST00000451154 RBM17Q96I25 401 aaKnown RBP35.47■■■■□ 3.27
USP42-204ENST00000451154 ZNF541Q9H0D2 1346 aa35.47■■■■□ 3.27
USP42-204ENST00000451154 CHADLQ6NUI6 762 aa35.46■■■■□ 3.27
USP42-204ENST00000451154 JMYQ8N9B5 988 aa35.46■■■■□ 3.27
USP42-204ENST00000451154 UTP14AQ9BVJ6 771 aaKnown RBP35.46■■■■□ 3.27
USP42-204ENST00000451154 TCERG1O14776 1098 aaKnown RBP35.45■■■■□ 3.27
USP42-204ENST00000451154 L3MBTL3Q96JM7 780 aaPredicted RBP35.45■■■■□ 3.27
USP42-204ENST00000451154 CRAMP1Q96RY5 1269 aa35.45■■■■□ 3.27
USP42-204ENST00000451154 RIC1Q4ADV7 1423 aa35.45■■■■□ 3.27
USP42-204ENST00000451154 CC2D2BQ6DHV5 1058 aa35.44■■■■□ 3.26
USP42-204ENST00000451154 SLC51AQ86UW1 340 aa35.44■■■■□ 3.26
USP42-204ENST00000451154 NLRP3Q96P20 1036 aa35.44■■■■□ 3.26
USP42-204ENST00000451154 PSMD1Q99460 953 aa35.44■■■■□ 3.26
USP42-204ENST00000451154 PRKRIP1Q9H875 184 aaPredicted RBP35.44■■■■□ 3.26
USP42-204ENST00000451154 IQCA1LA6NCM1 817 aa35.43■■■■□ 3.26
USP42-204ENST00000451154 DDX21Q9NR30 783 aaKnown RBP eCLIP35.43■■■■□ 3.26
USP42-204ENST00000451154 SNED1Q8TER0 1413 aa35.42■■■■□ 3.26
USP42-204ENST00000451154 FZD9O00144 591 aa35.42■■■■□ 3.26
USP42-204ENST00000451154 SLC10A5Q5PT55 438 aa35.42■■■■□ 3.26
USP42-204ENST00000451154 TAF1DQ9H5J8 278 aaPredicted RBP35.42■■■■□ 3.26
USP42-204ENST00000451154 PPEF1O14829 653 aaPredicted RBP35.39■■■■□ 3.26
USP42-204ENST00000451154 JDP2Q8WYK2 163 aa35.39■■■■□ 3.26
USP42-204ENST00000451154 CHPF2Q9P2E5 772 aa35.39■■■■□ 3.26
USP42-204ENST00000451154 SCN4AP35499 1836 aa35.39■■■■□ 3.26
USP42-204ENST00000451154 TCIRG1Q13488 830 aa35.38■■■■□ 3.25
USP42-204ENST00000451154 HSP90AB3PQ58FF7 597 aa35.38■■■■□ 3.25
USP42-204ENST00000451154 NLRP10Q86W26 655 aa35.38■■■■□ 3.25
USP42-204ENST00000451154 HCLS1P14317 486 aaPredicted RBP35.36■■■■□ 3.25
USP42-204ENST00000451154 HDGFL1Q5TGJ6 251 aa35.36■■■■□ 3.25
USP42-204ENST00000451154 LDHDQ86WU2 507 aa35.36■■■■□ 3.25
USP42-204ENST00000451154 HACL1Q9UJ83 578 aa35.36■■■■□ 3.25
USP42-204ENST00000451154 GRIPAP1Q4V328 841 aa35.35■■■■□ 3.25
USP42-204ENST00000451154 EAPPQ56P03 285 aaPredicted RBP35.35■■■■□ 3.25
USP42-204ENST00000451154 ZNF428Q96B54 188 aa35.35■■■■□ 3.25
USP42-204ENST00000451154 CFAP44Q96MT7 982 aa35.35■■■■□ 3.25
USP42-204ENST00000451154 TRMT112Q9UI30 125 aaKnown RBP35.34■■■■□ 3.25
USP42-204ENST00000451154 GPC2Q8N158 579 aa35.33■■■■□ 3.25
USP42-204ENST00000451154 LARGE2Q8N3Y3 721 aa35.33■■■■□ 3.25
USP42-204ENST00000451154 RNF123Q5XPI4 1314 aa35.32■■■■□ 3.25
USP42-204ENST00000451154 EPHX2P34913 555 aa35.32■■■■□ 3.24
USP42-204ENST00000451154 CLEC11AQ9Y240 323 aa35.32■■■■□ 3.24
USP42-204ENST00000451154 GJA3Q9Y6H8 435 aa35.32■■■■□ 3.24
USP42-204ENST00000451154 COL4A5P29400 1685 aa35.32■■■■□ 3.24
USP42-204ENST00000451154 ABCC4O15439 1325 aa35.32■■■■□ 3.24
USP42-204ENST00000451154 ANKRD36CQ5JPF3 1778 aa35.31■■■■□ 3.24
USP42-204ENST00000451154 APAF1O14727 1248 aa35.31■■■■□ 3.24
USP42-204ENST00000451154 EIF6P56537 245 aaKnown RBP35.31■■■■□ 3.24
USP42-204ENST00000451154 DUSP27Q5VZP5 1158 aa35.31■■■■□ 3.24
USP42-204ENST00000451154 MBIPQ9NS73 344 aa35.31■■■■□ 3.24
USP42-204ENST00000451154 ATP6V0A2Q9Y487 856 aa35.31■■■■□ 3.24
USP42-204ENST00000451154 HOXB7P09629 217 aa35.3■■■■□ 3.24
USP42-204ENST00000451154 TMX4Q9H1E5 349 aaPredicted RBP35.3■■■■□ 3.24
USP42-204ENST00000451154 ANKRD13DQ6ZTN6 518 aa35.29■■■■□ 3.24
USP42-204ENST00000451154 PLBD2Q8NHP8 589 aa35.29■■■■□ 3.24
USP42-204ENST00000451154 CREBZFQ9NS37 354 aa35.29■■■■□ 3.24
USP42-204ENST00000451154 DBF4Q9UBU7 674 aaPredicted RBP35.29■■■■□ 3.24
USP42-204ENST00000451154 SH3TC1Q8TE82 1336 aa35.29■■■■□ 3.24
USP42-204ENST00000451154 BBOX1O75936 387 aa35.26■■■■□ 3.24
USP42-204ENST00000451154 ZNF853P0CG23 659 aa35.26■■■■□ 3.24
USP42-204ENST00000451154 PASKQ96RG2 1323 aa35.26■■■■□ 3.23
USP42-204ENST00000451154 LAMB2P55268 1798 aa35.25■■■■□ 3.23
USP42-204ENST00000451154 ITGBL1O95965 494 aaPredicted RBP35.25■■■■□ 3.23
USP42-204ENST00000451154 PNMA8AQ86V59 439 aaPredicted RBP35.25■■■■□ 3.23
USP42-204ENST00000451154 MKRN1Q9UHC7 482 aaKnown RBP35.25■■■■□ 3.23
USP42-204ENST00000451154 ATP5J2-PTCD1G3V325 749 aa35.24■■■■□ 3.23
USP42-204ENST00000451154 PPIP5K2O43314 1243 aa35.24■■■■□ 3.23
USP42-204ENST00000451154 AOC3Q16853 763 aa35.24■■■■□ 3.23
USP42-204ENST00000451154 DDX46Q7L014 1031 aaKnown RBP35.24■■■■□ 3.23
USP42-204ENST00000451154 NIM1KQ8IY84 436 aa35.24■■■■□ 3.23
USP42-204ENST00000451154 HYPKQ9NX55 129 aa35.24■■■■□ 3.23
USP42-204ENST00000451154 SP8Q8IXZ3 490 aa35.23■■■■□ 3.23
USP42-204ENST00000451154 ISCA1Q9BUE6 129 aa35.23■■■■□ 3.23
USP42-204ENST00000451154 TAF1P21675 1872 aa35.22■■■■□ 3.23
USP42-204ENST00000451154 ELL2O00472 640 aaPredicted RBP35.21■■■■□ 3.23
USP42-204ENST00000451154 COL13A1Q5TAT6 717 aaPredicted RBP35.21■■■■□ 3.23
USP42-204ENST00000451154 MAP1SQ66K74 1059 aaPredicted RBP35.21■■■■□ 3.23
USP42-204ENST00000451154 FAM89AQ96GI7 184 aa35.21■■■■□ 3.23
USP42-204ENST00000451154 IFT57Q9NWB7 429 aa35.21■■■■□ 3.23
USP42-204ENST00000451154 GRAPQ13588 217 aa35.2■■■■□ 3.23
USP42-204ENST00000451154 DPP8Q6V1X1 898 aaPredicted RBP35.2■■■■□ 3.23
USP42-204ENST00000451154 GRAPLQ8TC17 118 aaPredicted RBP35.2■■■■□ 3.23
USP42-204ENST00000451154 RTFDC1Q9BY42 306 aaPredicted RBP35.2■■■■□ 3.23
USP42-204ENST00000451154 LMOD1P29536 600 aaPredicted RBP35.19■■■■□ 3.22
USP42-204ENST00000451154 EPS15P42566 896 aa35.19■■■■□ 3.22
USP42-204ENST00000451154 GNAI1P63096 354 aa35.19■■■■□ 3.22
USP42-204ENST00000451154 CNTROBQ8N137 903 aa35.19■■■■□ 3.22
USP42-204ENST00000451154 MPNDQ8N594 471 aa35.19■■■■□ 3.22
USP42-204ENST00000451154 SUPT20HQ8NEM7 779 aa35.19■■■■□ 3.22
USP42-204ENST00000451154 VPS33BQ9H267 617 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms