RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
LINC01004-202ENST00000450686 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
LINC01004-202ENST00000450686 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
LINC01004-202ENST00000450686 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
LINC01004-202ENST00000450686 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
LINC01004-202ENST00000450686 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
LINC01004-202ENST00000450686 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
LINC01004-202ENST00000450686 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
LINC01004-202ENST00000450686 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
LINC01004-202ENST00000450686 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
LINC01004-202ENST00000450686 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.256e-6■■■□□ 14.6
LINC01004-202ENST00000450686 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
LINC01004-202ENST00000450686 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
LINC01004-202ENST00000450686 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
LINC01004-202ENST00000450686 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
LINC01004-202ENST00000450686 SCN4AP35499 1836 aa13.46□□□□□ -0.25
LINC01004-202ENST00000450686 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
LINC01004-202ENST00000450686 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
LINC01004-202ENST00000450686 ANXA1P04083 346 aa13.46□□□□□ -0.25
LINC01004-202ENST00000450686 SOGA3Q5TF21 947 aa13.46□□□□□ -0.25
LINC01004-202ENST00000450686 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
LINC01004-202ENST00000450686 SNED1Q8TER0 1413 aa13.46□□□□□ -0.26
LINC01004-202ENST00000450686 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
LINC01004-202ENST00000450686 LTBP1Q14766 1721 aa13.45□□□□□ -0.26
LINC01004-202ENST00000450686 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
LINC01004-202ENST00000450686 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
LINC01004-202ENST00000450686 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 SUSD4Q5VX71 490 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
LINC01004-202ENST00000450686 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 ADAMTSL1Q8N6G6 1762 aa13.44□□□□□ -0.26
LINC01004-202ENST00000450686 PASKQ96RG2 1323 aa13.43□□□□□ -0.26
LINC01004-202ENST00000450686 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
LINC01004-202ENST00000450686 FMR1Q06787 632 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC01004-202ENST00000450686 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
LINC01004-202ENST00000450686 LDHDQ86WU2 507 aa13.43□□□□□ -0.26
LINC01004-202ENST00000450686 GJA3Q9Y6H8 435 aa13.43□□□□□ -0.26
LINC01004-202ENST00000450686 TAF1P21675 1872 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
LINC01004-202ENST00000450686 EPHX2P34913 555 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
LINC01004-202ENST00000450686 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 LAMB2P55268 1798 aa13.42□□□□□ -0.26
LINC01004-202ENST00000450686 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 FOXN1O15353 648 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 NTSR2O95665 410 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
LINC01004-202ENST00000450686 NEFMP07197 916 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 CNTNAP1P78357 1384 aa13.41□□□□□ -0.26
LINC01004-202ENST00000450686 ERVV-1B6SEH8 477 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 FZD9O00144 591 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 VEGFBP49765 207 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 ZNF34Q8IZ26 560 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
LINC01004-202ENST00000450686 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
LINC01004-202ENST00000450686 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
LINC01004-202ENST00000450686 RGL2O15211 777 aa13.39□□□□□ -0.27
LINC01004-202ENST00000450686 RIPK4P57078 832 aa13.39□□□□□ -0.27
LINC01004-202ENST00000450686 PDIA6Q15084 440 aa13.39□□□□□ -0.27
LINC01004-202ENST00000450686 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
LINC01004-202ENST00000450686 EPS15P42566 896 aa13.38□□□□□ -0.27
LINC01004-202ENST00000450686 AIMP1Q12904 312 aaKnown RBP13.38□□□□□ -0.27
LINC01004-202ENST00000450686 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
LINC01004-202ENST00000450686 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
LINC01004-202ENST00000450686 PSMD1Q99460 953 aa13.38□□□□□ -0.27
LINC01004-202ENST00000450686 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
LINC01004-202ENST00000450686 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
LINC01004-202ENST00000450686 HOXA10P31260 410 aaPredicted RBP13.37□□□□□ -0.27
LINC01004-202ENST00000450686 SCNN1DP51172 638 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 AOC3Q16853 763 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
LINC01004-202ENST00000450686 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 GPC2Q8N158 579 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 COL4A1P02462 1669 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 ABCC4O15439 1325 aa13.37□□□□□ -0.27
LINC01004-202ENST00000450686 TRAF5O00463 557 aa13.36□□□□□ -0.27
LINC01004-202ENST00000450686 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
LINC01004-202ENST00000450686 XAGE3Q8WTP9 111 aa13.36□□□□□ -0.27
LINC01004-202ENST00000450686 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
LINC01004-202ENST00000450686 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
LINC01004-202ENST00000450686 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
LINC01004-202ENST00000450686 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
LINC01004-202ENST00000450686 GRM1Q13255 1194 aa13.35□□□□□ -0.27
LINC01004-202ENST00000450686 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
LINC01004-202ENST00000450686 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
LINC01004-202ENST00000450686 UTP14AQ9BVJ6 771 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms