RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 GAS2L3Q86XJ1 694 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 PIGBQ92521 554 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 TMX3Q96JJ7 454 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 FSD1Q9BTV5 496 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 DIAPH3Q9NSV4 1193 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 PHRF1Q9P1Y6 1649 aaKnown RBP5.08□□□□□ -1.6
LMBR1-212ENST00000448926 WDR17Q8IZU2 1322 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 LRP10Q7Z4F1 713 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 RAB11FIP4Q86YS3 637 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 HELBQ8NG08 1087 aaPredicted RBP5.08□□□□□ -1.6
LMBR1-212ENST00000448926 METTL22Q9BUU2 404 aaPredicted RBP5.08□□□□□ -1.6
LMBR1-212ENST00000448926 ZDHHC9Q9Y397 364 aa5.08□□□□□ -1.6
LMBR1-212ENST00000448926 STRCQ7RTU9 1775 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 PRPF40AO75400 957 aaKnown RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 CASTP20810 708 aaKnown RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 RABEP1Q15276 862 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 SLC51AQ86UW1 340 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 STK11IPQ8N1F8 1099 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 SLC4A9Q96Q91 983 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 TMOD3Q9NYL9 352 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 DBNLQ9UJU6 430 aaKnown RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 PRIM1P49642 420 aaKnown RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 CHST3Q7LGC8 479 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 SNX21Q969T3 373 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 JAKMIP1Q96N16 626 aaKnown RBP5.07□□□□□ -1.6
LMBR1-212ENST00000448926 COL18A1P39060 1754 aa5.07□□□□□ -1.6
LMBR1-212ENST00000448926 ADORA1P30542 326 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 DDIT3P35638 169 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 PTPN12Q05209 780 aaKnown RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 RAB3GAP1Q15042 981 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 FAM173BQ6P4H8 233 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 OSBPL3Q9H4L5 887 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 ECHDC1Q9NTX5 307 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 NAP1L2Q9ULW6 460 aaPredicted RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 SNX14Q9Y5W7 946 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 COL5A2P05997 1499 aaPredicted RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 HEG1Q9ULI3 1381 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 WTIPA6NIX2 430 aaPredicted RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 KCNQ2O43526 872 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 ST18O60284 1047 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 BAG4O95429 457 aaKnown RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 CAVIN1Q6NZI2 390 aaKnown RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 CNTROBQ8N137 903 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 ZBTB1Q9Y2K1 713 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 SOS2Q07890 1332 aaPredicted RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 SCN11AQ9UI33 1791 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 GOLIM4O00461 696 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 SGSM2O43147 1006 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 ALDH1L1O75891 902 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 HOXB7P09629 217 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 AK2P54819 239 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 VPS53Q5VIR6 699 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 FERMT3Q86UX7 667 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 LSG1Q9H089 658 aaKnown RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 STAP2Q9UGK3 403 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 DDX49Q9Y6V7 483 aaKnown RBP5.06□□□□□ -1.6
LMBR1-212ENST00000448926 CACNA1FO60840 1977 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 PCDH11XQ9BZA7 1347 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 PCDH11YQ9BZA8 1340 aa5.06□□□□□ -1.6
LMBR1-212ENST00000448926 USP54Q70EL1 1684 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 XRCC6P12956 609 aaKnown RBP eCLIP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 FKBP4Q02790 459 aaKnown RBP eCLIP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 BICDL1Q6ZP65 573 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 KIAA1211Q6ZU35 1233 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 BABAM1Q9NWV8 329 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 IQSEC3Q9UPP2 1182 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 AFDNP55196 1824 aaKnown RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 RAB11FIP3O75154 756 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 HCLS1P14317 486 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 RUFY3Q7L099 469 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 ATG3Q9NT62 314 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 TCHHQ07283 1943 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 KIF1AQ12756 1690 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 COL15A1P39059 1388 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 SIPA1L3O60292 1781 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 GADD45BO75293 160 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 RFX5P48382 616 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 HAND2P61296 217 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 SCARF1Q14162 830 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 TNNI3KQ59H18 835 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 RNF214Q8ND24 703 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 CHMP4CQ96CF2 233 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 RBM8AQ9Y5S9 174 aaKnown RBP5.05□□□□□ -1.6
LMBR1-212ENST00000448926 FPGT-TNNI3KV9GXZ4 949 aa5.05□□□□□ -1.6
LMBR1-212ENST00000448926 OVOS2A0A0G2JMS6 1433 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 NCOA3Q9Y6Q9 1424 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 GLRX3O76003 335 aaKnown RBP5.04□□□□□ -1.6
LMBR1-212ENST00000448926 FOXO4P98177 505 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 TTLL5Q6EMB2 1281 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 GPHNQ9NQX3 736 aaPredicted RBP5.04□□□□□ -1.6
LMBR1-212ENST00000448926 NCAPD2Q15021 1401 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 MCCP23508 829 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 PLBD2Q8NHP8 589 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 C8orf37Q96NL8 207 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 CARD10Q9BWT7 1032 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 CWC25Q9NXE8 425 aaPredicted RBP5.04□□□□□ -1.6
LMBR1-212ENST00000448926 DENND2AQ9ULE3 1009 aa5.04□□□□□ -1.6
LMBR1-212ENST00000448926 VPS37CA5D8V6 355 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms