RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L21D6R901 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 APBA3O96018 575 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 KCNQ4P56696 695 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
SEMA3A-205ENST00000448879 A6NJR5 290 aa9.34□□□□□ -0.91
SEMA3A-205ENST00000448879 ALBP02768 609 aa9.34□□□□□ -0.91
SEMA3A-205ENST00000448879 PTK7Q13308 1070 aa9.34□□□□□ -0.91
SEMA3A-205ENST00000448879 GATA4P43694 442 aa9.33□□□□□ -0.92
SEMA3A-205ENST00000448879 RTN1Q16799 776 aa9.33□□□□□ -0.92
SEMA3A-205ENST00000448879 C8orf86Q6ZUL3 223 aa9.33□□□□□ -0.92
SEMA3A-205ENST00000448879 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
SEMA3A-205ENST00000448879 MDFIQ99750 246 aa9.33□□□□□ -0.92
SEMA3A-205ENST00000448879 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 TRIM28Q13263 835 aaKnown RBP9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 DOC2BQ14184 412 aa9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 MICALL1Q8N3F8 863 aa9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 STARD13Q9Y3M8 1113 aa9.32□□□□□ -0.92
SEMA3A-205ENST00000448879 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
SEMA3A-205ENST00000448879 IGFBP4P22692 258 aa9.31□□□□□ -0.92
SEMA3A-205ENST00000448879 TGFBR3LH3BV60 316 aa9.3□□□□□ -0.92
SEMA3A-205ENST00000448879 LILRB5O75023 590 aa9.3□□□□□ -0.92
SEMA3A-205ENST00000448879 EPB42P16452 691 aa9.3□□□□□ -0.92
SEMA3A-205ENST00000448879 PRDM6Q9NQX0 595 aa9.3□□□□□ -0.92
SEMA3A-205ENST00000448879 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
SEMA3A-205ENST00000448879 IER5Q5VY09 327 aa9.29□□□□□ -0.92
SEMA3A-205ENST00000448879 NACC1Q96RE7 527 aa9.29□□□□□ -0.92
SEMA3A-205ENST00000448879 SLC6A14Q9UN76 642 aa9.29□□□□□ -0.92
SEMA3A-205ENST00000448879 NFKB1P19838 968 aa9.28□□□□□ -0.92
SEMA3A-205ENST00000448879 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
SEMA3A-205ENST00000448879 JPH1Q9HDC5 661 aaPredicted RBP9.28□□□□□ -0.92
SEMA3A-205ENST00000448879 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
SEMA3A-205ENST00000448879 CCINQ13939 588 aa9.27□□□□□ -0.93
SEMA3A-205ENST00000448879 NUDT8Q8WV74 236 aa9.27□□□□□ -0.93
SEMA3A-205ENST00000448879 SEMA6BQ9H3T3 888 aa9.27□□□□□ -0.93
SEMA3A-205ENST00000448879 KLK14Q9P0G3 267 aa9.27□□□□□ -0.93
SEMA3A-205ENST00000448879 NID1P14543 1247 aa9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 RFX1P22670 979 aa9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 DGKZQ13574 1117 aa9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 GSX2Q9BZM3 304 aa9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 DNAJB12Q9NXW2 375 aaKnown RBP9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 ZNF777Q9ULD5 760 aaPredicted RBP9.26□□□□□ -0.93
SEMA3A-205ENST00000448879 IDH3AP50213 366 aa9.25□□□□□ -0.93
SEMA3A-205ENST00000448879 GRIK4Q16099 956 aa9.25□□□□□ -0.93
SEMA3A-205ENST00000448879 CDCA8Q53HL2 280 aa9.25□□□□□ -0.93
SEMA3A-205ENST00000448879 C20orf204Q6ZNR8 217 aa9.25□□□□□ -0.93
SEMA3A-205ENST00000448879 FOXO3O43524 673 aa9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 RAC1P63000 192 aa9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 COL9A3Q14050 684 aaPredicted RBP9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 PSAPL1Q6NUJ1 521 aa9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 KRT25Q7Z3Z0 450 aa9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 BCS1LQ9Y276 419 aa9.24□□□□□ -0.93
SEMA3A-205ENST00000448879 ARSDP51689 593 aa9.23□□□□□ -0.93
SEMA3A-205ENST00000448879 ARXQ96QS3 562 aa9.23□□□□□ -0.93
SEMA3A-205ENST00000448879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.93
SEMA3A-205ENST00000448879 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
SEMA3A-205ENST00000448879 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
SEMA3A-205ENST00000448879 XP32Q5T750 250 aa9.22□□□□□ -0.93
SEMA3A-205ENST00000448879 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
SEMA3A-205ENST00000448879 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
SEMA3A-205ENST00000448879 CPB1P15086 417 aa9.21□□□□□ -0.94
SEMA3A-205ENST00000448879 WEE1P30291 646 aa9.21□□□□□ -0.94
SEMA3A-205ENST00000448879 PCSK7Q16549 785 aa9.21□□□□□ -0.94
SEMA3A-205ENST00000448879 FAM35AQ86V20 835 aa9.21□□□□□ -0.94
SEMA3A-205ENST00000448879 A0A0A0MRY4 1105 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 C9orf172C9J069 976 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 MICAL2O94851 1124 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 INPP5BP32019 993 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 C11orf91Q3C1V1 193 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
SEMA3A-205ENST00000448879 RARAP10276 462 aa9.19□□□□□ -0.94
SEMA3A-205ENST00000448879 ELNP15502 786 aa9.19□□□□□ -0.94
SEMA3A-205ENST00000448879 Q8N3U1 123 aa9.19□□□□□ -0.94
SEMA3A-205ENST00000448879 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 AFF1P51825 1210 aaKnown RBP9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 MLLT1Q03111 559 aaPredicted RBP9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 DMRTC2Q8IXT2 367 aaPredicted RBP9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 IFT43Q96FT9 208 aa9.18□□□□□ -0.94
SEMA3A-205ENST00000448879 SASH3O75995 380 aa9.17□□□□□ -0.94
SEMA3A-205ENST00000448879 TARSP26639 723 aaKnown RBP9.17□□□□□ -0.94
SEMA3A-205ENST00000448879 RSPO4Q2I0M5 234 aaPredicted RBP9.17□□□□□ -0.94
SEMA3A-205ENST00000448879 ELMSAN1Q6PJG2 1045 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms