RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 HSP90AB3PQ58FF7 597 aa29.47■■■□□ 2.31
NME4-206ENST00000448828 UTP14AQ9BVJ6 771 aaKnown RBP29.47■■■□□ 2.31
NME4-206ENST00000448828 GLTPD2A6NH11 291 aa29.46■■■□□ 2.31
NME4-206ENST00000448828 OLFM4Q6UX06 510 aa29.46■■■□□ 2.31
NME4-206ENST00000448828 DBF4Q9UBU7 674 aaPredicted RBP29.46■■■□□ 2.31
NME4-206ENST00000448828 RIC1Q4ADV7 1423 aa29.45■■■□□ 2.31
NME4-206ENST00000448828 CRY2Q49AN0 593 aa29.45■■■□□ 2.31
NME4-206ENST00000448828 ELL2O00472 640 aaPredicted RBP29.44■■■□□ 2.3
NME4-206ENST00000448828 ZNF853P0CG23 659 aa29.44■■■□□ 2.3
NME4-206ENST00000448828 DPY19L2Q6NUT2 758 aa29.44■■■□□ 2.3
NME4-206ENST00000448828 C7orf43Q8WVR3 580 aa29.43■■■□□ 2.3
NME4-206ENST00000448828 DICER1Q9UPY3 1922 aaKnown RBP29.43■■■□□ 2.3
NME4-206ENST00000448828 ZNF428Q96B54 188 aa29.42■■■□□ 2.3
NME4-206ENST00000448828 RBM17Q96I25 401 aaKnown RBP29.42■■■□□ 2.3
NME4-206ENST00000448828 FKBP4Q02790 459 aaKnown RBP eCLIP29.41■■■□□ 2.3
NME4-206ENST00000448828 RTKN2Q8IZC4 609 aa29.41■■■□□ 2.3
NME4-206ENST00000448828 RBM46Q8TBY0 533 aaKnown RBP29.41■■■□□ 2.3
NME4-206ENST00000448828 NLRP3Q96P20 1036 aa29.41■■■□□ 2.3
NME4-206ENST00000448828 HYPKQ9NX55 129 aa29.41■■■□□ 2.3
NME4-206ENST00000448828 TCIRG1Q13488 830 aa29.4■■■□□ 2.3
NME4-206ENST00000448828 C3orf67Q6ZVT6 689 aa29.4■■■□□ 2.3
NME4-206ENST00000448828 NLRP10Q86W26 655 aa29.4■■■□□ 2.3
NME4-206ENST00000448828 ZNF277Q9NRM2 450 aaPredicted RBP29.4■■■□□ 2.3
NME4-206ENST00000448828 TRMT112Q9UI30 125 aaKnown RBP29.4■■■□□ 2.3
NME4-206ENST00000448828 TCERG1O14776 1098 aaKnown RBP29.39■■■□□ 2.3
NME4-206ENST00000448828 PLBD2Q8NHP8 589 aa29.39■■■□□ 2.3
NME4-206ENST00000448828 VEGFAP15692 232 aaPredicted RBP29.38■■■□□ 2.29
NME4-206ENST00000448828 ANKRD13DQ6ZTN6 518 aa29.38■■■□□ 2.29
NME4-206ENST00000448828 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
NME4-206ENST00000448828 PPEF1O14829 653 aaPredicted RBP29.37■■■□□ 2.29
NME4-206ENST00000448828 HCLS1P14317 486 aaPredicted RBP29.36■■■□□ 2.29
NME4-206ENST00000448828 HOXA10P31260 410 aaPredicted RBP29.36■■■□□ 2.29
NME4-206ENST00000448828 TSR2Q969E8 191 aaKnown RBP29.36■■■□□ 2.29
NME4-206ENST00000448828 SH3TC1Q8TE82 1336 aa29.36■■■□□ 2.29
NME4-206ENST00000448828 GOLGA2Q08379 1002 aa29.35■■■□□ 2.29
NME4-206ENST00000448828 C8orf58Q8NAV2 365 aa29.35■■■□□ 2.29
NME4-206ENST00000448828 ATP5J2-PTCD1G3V325 749 aa29.34■■■□□ 2.29
NME4-206ENST00000448828 SYNE4Q8N205 404 aa29.34■■■□□ 2.29
NME4-206ENST00000448828 CRAMP1Q96RY5 1269 aa29.34■■■□□ 2.29
NME4-206ENST00000448828 TMX4Q9H1E5 349 aaPredicted RBP29.34■■■□□ 2.29
NME4-206ENST00000448828 WDR90Q96KV7 1748 aa29.34■■■□□ 2.29
NME4-206ENST00000448828 RIC3Q7Z5B4 369 aa29.33■■■□□ 2.29
NME4-206ENST00000448828 SALL2Q9Y467 1007 aaPredicted RBP29.33■■■□□ 2.29
NME4-206ENST00000448828 LAMB2P55268 1798 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 DDNO94850 711 aaPredicted RBP29.32■■■□□ 2.28
NME4-206ENST00000448828 IARSP41252 1262 aaKnown RBP29.32■■■□□ 2.28
NME4-206ENST00000448828 APLP1P51693 650 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 FSTL1Q12841 308 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 SLC10A5Q5PT55 438 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 CC2D2BQ6DHV5 1058 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 WWC1Q8IX03 1113 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 SMC1BQ8NDV3 1235 aa29.32■■■□□ 2.28
NME4-206ENST00000448828 PHAXQ9H814 394 aaKnown RBP29.32■■■□□ 2.28
NME4-206ENST00000448828 CCDC27Q2M243 656 aa29.31■■■□□ 2.28
NME4-206ENST00000448828 ABCC4O15439 1325 aa29.3■■■□□ 2.28
NME4-206ENST00000448828 CCDC30Q5VVM6 783 aa29.3■■■□□ 2.28
NME4-206ENST00000448828 SLC51AQ86UW1 340 aa29.3■■■□□ 2.28
NME4-206ENST00000448828 RTL5Q5HYW3 569 aaPredicted RBP29.29■■■□□ 2.28
NME4-206ENST00000448828 TSPYL6Q8N831 410 aa29.29■■■□□ 2.28
NME4-206ENST00000448828 PSMD1Q99460 953 aa29.29■■■□□ 2.28
NME4-206ENST00000448828 CHMP4AQ9BY43 222 aa29.29■■■□□ 2.28
NME4-206ENST00000448828 DDX46Q7L014 1031 aaKnown RBP29.28■■■□□ 2.28
NME4-206ENST00000448828 ISCA1Q9BUE6 129 aa29.28■■■□□ 2.28
NME4-206ENST00000448828 ZNF541Q9H0D2 1346 aa29.27■■■□□ 2.28
NME4-206ENST00000448828 FAM9BQ8IZU0 186 aa29.27■■■□□ 2.28
NME4-206ENST00000448828 JDP2Q8WYK2 163 aa29.27■■■□□ 2.28
NME4-206ENST00000448828 FAM89AQ96GI7 184 aa29.27■■■□□ 2.28
NME4-206ENST00000448828 SNED1Q8TER0 1413 aa29.27■■■□□ 2.28
NME4-206ENST00000448828 GRIPAP1Q4V328 841 aa29.26■■■□□ 2.27
NME4-206ENST00000448828 DDX60Q8IY21 1712 aaKnown RBP29.25■■■□□ 2.27
NME4-206ENST00000448828 POTECB2RU33 542 aa29.25■■■□□ 2.27
NME4-206ENST00000448828 DDX58O95786 925 aaKnown RBP29.25■■■□□ 2.27
NME4-206ENST00000448828 MYD88Q99836 296 aa29.25■■■□□ 2.27
NME4-206ENST00000448828 STK31Q9BXU1 1019 aa29.25■■■□□ 2.27
NME4-206ENST00000448828 LARGE2Q8N3Y3 721 aa29.24■■■□□ 2.27
NME4-206ENST00000448828 ATP6V0A2Q9Y487 856 aa29.24■■■□□ 2.27
NME4-206ENST00000448828 TWISTNBQ3B726 338 aaPredicted RBP29.23■■■□□ 2.27
NME4-206ENST00000448828 IL16Q14005 1332 aa29.22■■■□□ 2.27
NME4-206ENST00000448828 IQCA1LA6NCM1 817 aa29.22■■■□□ 2.27
NME4-206ENST00000448828 GRAPQ13588 217 aa29.21■■■□□ 2.27
NME4-206ENST00000448828 GRAPLQ8TC17 118 aaPredicted RBP29.21■■■□□ 2.27
NME4-206ENST00000448828 PPIP5K2O43314 1243 aa29.2■■■□□ 2.26
NME4-206ENST00000448828 BBOX1O75936 387 aa29.2■■■□□ 2.26
NME4-206ENST00000448828 EIF6P56537 245 aaKnown RBP29.2■■■□□ 2.26
NME4-206ENST00000448828 HTRA3P83110 453 aa29.2■■■□□ 2.26
NME4-206ENST00000448828 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.26
NME4-206ENST00000448828 FZD9O00144 591 aa29.19■■■□□ 2.26
NME4-206ENST00000448828 IRS4O14654 1257 aaPredicted RBP29.19■■■□□ 2.26
NME4-206ENST00000448828 DPP8Q6V1X1 898 aaPredicted RBP29.19■■■□□ 2.26
NME4-206ENST00000448828 GJA3Q9Y6H8 435 aa29.19■■■□□ 2.26
NME4-206ENST00000448828 COL4A5P29400 1685 aa29.18■■■□□ 2.26
NME4-206ENST00000448828 TRIM28Q13263 835 aaKnown RBP29.18■■■□□ 2.26
NME4-206ENST00000448828 AOC3Q16853 763 aa29.18■■■□□ 2.26
NME4-206ENST00000448828 NIM1KQ8IY84 436 aa29.18■■■□□ 2.26
NME4-206ENST00000448828 L3MBTL3Q96JM7 780 aaPredicted RBP29.18■■■□□ 2.26
NME4-206ENST00000448828 MAP3K2Q9Y2U5 619 aa29.18■■■□□ 2.26
NME4-206ENST00000448828 TAF1P21675 1872 aa29.17■■■□□ 2.26
NME4-206ENST00000448828 NCBP3Q53F19 620 aaKnown RBP29.17■■■□□ 2.26
NME4-206ENST00000448828 SP8Q8IXZ3 490 aa29.17■■■□□ 2.26
NME4-206ENST00000448828 ZBTB38Q8NAP3 1195 aaPredicted RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms