RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 MYL6BP14649 208 aa32.25■■■□□ 2.75
PMS1-214ENST00000446877 GPTP24298 496 aa32.25■■■□□ 2.75
PMS1-214ENST00000446877 TTLL7Q6ZT98 887 aa32.25■■■□□ 2.75
PMS1-214ENST00000446877 LMOD1P29536 600 aaPredicted RBP32.24■■■□□ 2.75
PMS1-214ENST00000446877 HOXA10P31260 410 aaPredicted RBP32.24■■■□□ 2.75
PMS1-214ENST00000446877 EIF4A1P60842 406 aaKnown RBP32.24■■■□□ 2.75
PMS1-214ENST00000446877 DEFB115Q30KQ5 88 aa32.24■■■□□ 2.75
PMS1-214ENST00000446877 RBM17Q96I25 401 aaKnown RBP32.23■■■□□ 2.75
PMS1-214ENST00000446877 ZBTB3Q9H5J0 574 aa32.23■■■□□ 2.75
PMS1-214ENST00000446877 LARGE2Q8N3Y3 721 aa32.22■■■□□ 2.75
PMS1-214ENST00000446877 RASSF10A6NK89 507 aa32.21■■■□□ 2.75
PMS1-214ENST00000446877 TMX4Q9H1E5 349 aaPredicted RBP32.21■■■□□ 2.75
PMS1-214ENST00000446877 WBP1LQ9NX94 342 aa32.21■■■□□ 2.75
PMS1-214ENST00000446877 ABT1Q9ULW3 272 aaKnown RBP32.21■■■□□ 2.75
PMS1-214ENST00000446877 SUSD4Q5VX71 490 aa32.2■■■□□ 2.75
PMS1-214ENST00000446877 CRAMP1Q96RY5 1269 aa32.2■■■□□ 2.75
PMS1-214ENST00000446877 TCERG1O14776 1098 aaKnown RBP32.19■■■□□ 2.74
PMS1-214ENST00000446877 NFE2L2Q16236 605 aa32.19■■■□□ 2.74
PMS1-214ENST00000446877 PNNQ9H307 717 aaKnown RBP32.19■■■□□ 2.74
PMS1-214ENST00000446877 IBTKQ9P2D0 1353 aaPredicted RBP32.19■■■□□ 2.74
PMS1-214ENST00000446877 PPEF1O14829 653 aaPredicted RBP32.18■■■□□ 2.74
PMS1-214ENST00000446877 UBN2Q6ZU65 1347 aa32.18■■■□□ 2.74
PMS1-214ENST00000446877 PPP1R42Q7Z4L9 355 aa32.17■■■□□ 2.74
PMS1-214ENST00000446877 THUMPD2Q9BTF0 503 aaKnown RBP32.17■■■□□ 2.74
PMS1-214ENST00000446877 DDX21Q9NR30 783 aaKnown RBP eCLIP32.17■■■□□ 2.74
PMS1-214ENST00000446877 SNED1Q8TER0 1413 aa32.17■■■□□ 2.74
PMS1-214ENST00000446877 LBX1P52954 281 aa32.16■■■□□ 2.74
PMS1-214ENST00000446877 MAP2K1Q02750 393 aaPredicted RBP32.16■■■□□ 2.74
PMS1-214ENST00000446877 ZNF34Q8IZ26 560 aa32.16■■■□□ 2.74
PMS1-214ENST00000446877 GIGYF2Q6Y7W6 1299 aaKnown RBP32.15■■■□□ 2.74
PMS1-214ENST00000446877 NIM1KQ8IY84 436 aa32.15■■■□□ 2.74
PMS1-214ENST00000446877 NLRP3Q96P20 1036 aa32.15■■■□□ 2.74
PMS1-214ENST00000446877 PLEKHF1Q96S99 279 aa32.15■■■□□ 2.74
PMS1-214ENST00000446877 WDR33Q9C0J8 1336 aaKnown RBP32.15■■■□□ 2.74
PMS1-214ENST00000446877 MAPK8IP3Q9UPT6 1336 aa32.15■■■□□ 2.74
PMS1-214ENST00000446877 RIC1Q4ADV7 1423 aa32.15■■■□□ 2.74
PMS1-214ENST00000446877 PARP10Q53GL7 1025 aa32.14■■■□□ 2.74
PMS1-214ENST00000446877 ERBB4Q15303 1308 aa32.14■■■□□ 2.74
PMS1-214ENST00000446877 NTSR2O95665 410 aa32.13■■■□□ 2.73
PMS1-214ENST00000446877 EPS15P42566 896 aa32.13■■■□□ 2.73
PMS1-214ENST00000446877 SCNN1DP51172 638 aa32.13■■■□□ 2.73
PMS1-214ENST00000446877 USP50Q70EL3 339 aaPredicted RBP32.12■■■□□ 2.73
PMS1-214ENST00000446877 PPIP5K2O43314 1243 aa32.11■■■□□ 2.73
PMS1-214ENST00000446877 TSPYL4Q9UJ04 414 aa32.11■■■□□ 2.73
PMS1-214ENST00000446877 LAMB4A4D0S4 1761 aa32.11■■■□□ 2.73
PMS1-214ENST00000446877 ADAMTSL1Q8N6G6 1762 aa32.11■■■□□ 2.73
PMS1-214ENST00000446877 PAXIP1Q6ZW49 1069 aaPredicted RBP32.1■■■□□ 2.73
PMS1-214ENST00000446877 UTP14AQ9BVJ6 771 aaKnown RBP32.1■■■□□ 2.73
PMS1-214ENST00000446877 C3orf67Q6ZVT6 689 aa32.09■■■□□ 2.73
PMS1-214ENST00000446877 VPS33BQ9H267 617 aa32.09■■■□□ 2.73
PMS1-214ENST00000446877 EIF2S2P20042 333 aaKnown RBP32.08■■■□□ 2.73
PMS1-214ENST00000446877 ECE1P42892 770 aa32.08■■■□□ 2.73
PMS1-214ENST00000446877 ATP6V0A2Q9Y487 856 aa32.08■■■□□ 2.73
PMS1-214ENST00000446877 HSPA8P11142 646 aaKnown RBP32.07■■■□□ 2.72
PMS1-214ENST00000446877 SUPT20HQ8NEM7 779 aa32.07■■■□□ 2.72
PMS1-214ENST00000446877 BEGAINQ9BUH8 593 aa32.07■■■□□ 2.72
PMS1-214ENST00000446877 COL4A5P29400 1685 aa32.06■■■□□ 2.72
PMS1-214ENST00000446877 AOC3Q16853 763 aa32.06■■■□□ 2.72
PMS1-214ENST00000446877 SLC10A5Q5PT55 438 aa32.06■■■□□ 2.72
PMS1-214ENST00000446877 SLC51AQ86UW1 340 aa32.05■■■□□ 2.72
PMS1-214ENST00000446877 CAPNS2Q96L46 248 aa32.05■■■□□ 2.72
PMS1-214ENST00000446877 ADARB2Q9NS39 739 aaKnown RBP32.05■■■□□ 2.72
PMS1-214ENST00000446877 ZNRF3Q9ULT6 936 aa32.05■■■□□ 2.72
PMS1-214ENST00000446877 NUP98P52948 1817 aa32.05■■■□□ 2.72
PMS1-214ENST00000446877 FMR1Q06787 632 aaKnown RBP eCLIP32.04■■■□□ 2.72
PMS1-214ENST00000446877 GRM1Q13255 1194 aa32.04■■■□□ 2.72
PMS1-214ENST00000446877 KDM3BQ7LBC6 1761 aa32.04■■■□□ 2.72
PMS1-214ENST00000446877 BBOX1O75936 387 aa32.03■■■□□ 2.72
PMS1-214ENST00000446877 GPRC5DQ9NZD1 345 aa32.03■■■□□ 2.72
PMS1-214ENST00000446877 TRAF5O00463 557 aa32.02■■■□□ 2.72
PMS1-214ENST00000446877 PDIA6Q15084 440 aa32.02■■■□□ 2.72
PMS1-214ENST00000446877 GPR101Q96P66 508 aaPredicted RBP32.02■■■□□ 2.72
PMS1-214ENST00000446877 RIPK4P57078 832 aa32.01■■■□□ 2.71
PMS1-214ENST00000446877 HSP90AB3PQ58FF7 597 aa32.01■■■□□ 2.71
PMS1-214ENST00000446877 DPP8Q6V1X1 898 aaPredicted RBP32.01■■■□□ 2.71
PMS1-214ENST00000446877 ABCC4O15439 1325 aa32■■■□□ 2.71
PMS1-214ENST00000446877 CXCL9Q07325 125 aa32■■■□□ 2.71
PMS1-214ENST00000446877 CST9Q5W186 159 aa32■■■□□ 2.71
PMS1-214ENST00000446877 CYP4F22Q6NT55 531 aa32■■■□□ 2.71
PMS1-214ENST00000446877 LRP10Q7Z4F1 713 aa32■■■□□ 2.71
PMS1-214ENST00000446877 BABAM1Q9NWV8 329 aa32■■■□□ 2.71
PMS1-214ENST00000446877 SP8Q8IXZ3 490 aa31.99■■■□□ 2.71
PMS1-214ENST00000446877 RTFDC1Q9BY42 306 aaPredicted RBP31.99■■■□□ 2.71
PMS1-214ENST00000446877 ANXA1P04083 346 aa31.98■■■□□ 2.71
PMS1-214ENST00000446877 PROSER3Q2NL68 480 aa31.98■■■□□ 2.71
PMS1-214ENST00000446877 MPNDQ8N594 471 aa31.98■■■□□ 2.71
PMS1-214ENST00000446877 ABHD8Q96I13 439 aa31.98■■■□□ 2.71
PMS1-214ENST00000446877 TLL2Q9Y6L7 1015 aa31.98■■■□□ 2.71
PMS1-214ENST00000446877 GMPSP49915 693 aaPredicted RBP31.97■■■□□ 2.71
PMS1-214ENST00000446877 AIMP1Q12904 312 aaKnown RBP31.97■■■□□ 2.71
PMS1-214ENST00000446877 DDX46Q7L014 1031 aaKnown RBP31.97■■■□□ 2.71
PMS1-214ENST00000446877 COPS6Q7L5N1 327 aa31.97■■■□□ 2.71
PMS1-214ENST00000446877 LTBP1Q14766 1721 aa31.97■■■□□ 2.71
PMS1-214ENST00000446877 HCLS1P14317 486 aaPredicted RBP31.96■■■□□ 2.71
PMS1-214ENST00000446877 LMOD3Q0VAK6 560 aa31.96■■■□□ 2.71
PMS1-214ENST00000446877 CIAPIN1Q6FI81 312 aa31.96■■■□□ 2.71
PMS1-214ENST00000446877 BCL2L13Q9BXK5 485 aa31.96■■■□□ 2.71
PMS1-214ENST00000446877 DLG5Q8TDM6 1919 aa31.96■■■□□ 2.71
PMS1-214ENST00000446877 TNIP1Q15025 636 aa31.95■■■□□ 2.71
PMS1-214ENST00000446877 NLRP10Q86W26 655 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms