RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 DAPK1P53355 1430 aa8.52□□□□□ -1.05
MCF2-206ENST00000446225 NBPF20Q3BBV1 942 aa8.51□□□□□ -1.05
MCF2-206ENST00000446225 MRFAP1L1Q96HT8 127 aa8.51□□□□□ -1.05
MCF2-206ENST00000446225 ZNF358Q9NW07 568 aa8.51□□□□□ -1.05
MCF2-206ENST00000446225 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
MCF2-206ENST00000446225 CTSHP09668 335 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 PTPRKQ15262 1439 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 INO80Q9ULG1 1556 aaPredicted RBP8.5□□□□□ -1.05
MCF2-206ENST00000446225 A2MP01023 1474 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
MCF2-206ENST00000446225 SIGLEC1Q9BZZ2 1709 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 TPD52L2O43399 206 aaKnown RBP8.5□□□□□ -1.05
MCF2-206ENST00000446225 SCUBE3Q8IX30 993 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 THAP11Q96EK4 314 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 STIM2Q9P246 746 aa8.5□□□□□ -1.05
MCF2-206ENST00000446225 RRBP1Q9P2E9 1410 aaKnown RBP8.49□□□□□ -1.05
MCF2-206ENST00000446225 SRA1Q9HD15 236 aaKnown RBP8.49□□□□□ -1.05
MCF2-206ENST00000446225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
MCF2-206ENST00000446225 K7ELQ4 463 aaPredicted RBP8.48□□□□□ -1.05
MCF2-206ENST00000446225 KIF3BO15066 747 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 XRCC5P13010 732 aaKnown RBP8.48□□□□□ -1.05
MCF2-206ENST00000446225 GGT6Q6P531 493 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 HS2ST1Q7LGA3 356 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
MCF2-206ENST00000446225 AK5Q9Y6K8 562 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
MCF2-206ENST00000446225 ZBTB24O43167 697 aaPredicted RBP8.48□□□□□ -1.05
MCF2-206ENST00000446225 NEFLP07196 543 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 PSEN2P49810 448 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 PRR14Q9BWN1 585 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 IFT57Q9NWB7 429 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 MAST1Q9Y2H9 1570 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 ANKRD30AQ9BXX3 1397 aa8.48□□□□□ -1.05
MCF2-206ENST00000446225 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
MCF2-206ENST00000446225 GORABQ5T7V8 394 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 CKAP2LQ8IYA6 745 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 PCDH12Q9NPG4 1184 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.47□□□□□ -1.05
MCF2-206ENST00000446225 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 KIF15Q9NS87 1388 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 SHANK2Q9UPX8 1470 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 AGLP35573 1532 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 REREQ9P2R6 1566 aa8.47□□□□□ -1.05
MCF2-206ENST00000446225 GJA8P48165 433 aa8.46□□□□□ -1.05
MCF2-206ENST00000446225 TNS4Q8IZW8 715 aa8.46□□□□□ -1.05
MCF2-206ENST00000446225 FBF1Q8TES7 1133 aa8.46□□□□□ -1.05
MCF2-206ENST00000446225 GGT7Q9UJ14 662 aa8.46□□□□□ -1.05
MCF2-206ENST00000446225 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
MCF2-206ENST00000446225 MYCP01106 439 aaPredicted RBP8.46□□□□□ -1.06
MCF2-206ENST00000446225 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
MCF2-206ENST00000446225 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
MCF2-206ENST00000446225 EXOC8Q8IYI6 725 aa8.46□□□□□ -1.06
MCF2-206ENST00000446225 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
MCF2-206ENST00000446225 TNFRSF10BO14763 440 aa8.45□□□□□ -1.06
MCF2-206ENST00000446225 CEBPAP49715 358 aaPredicted RBP8.45□□□□□ -1.06
MCF2-206ENST00000446225 COX20Q5RI15 118 aa8.45□□□□□ -1.06
MCF2-206ENST00000446225 ATCAYQ86WG3 371 aa8.45□□□□□ -1.06
MCF2-206ENST00000446225 SLC10A4Q96EP9 437 aa8.45□□□□□ -1.06
MCF2-206ENST00000446225 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
MCF2-206ENST00000446225 BCORL1Q5H9F3 1711 aa8.45□□□□□ -1.06
MCF2-206ENST00000446225 TMEM229AB2RXF0 380 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 PLXNC1O60486 1568 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 MZF1P28698 734 aaPredicted RBP8.44□□□□□ -1.06
MCF2-206ENST00000446225 ADAMTSL3P82987 1691 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
MCF2-206ENST00000446225 TMED8Q6PL24 325 aaPredicted RBP8.44□□□□□ -1.06
MCF2-206ENST00000446225 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
MCF2-206ENST00000446225 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 CROCC2H7BZ55 1655 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 ADGBQ8N7X0 1667 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 ADGRL2O95490 1459 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 ENPP3O14638 875 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 HSP90AB2PQ58FF8 381 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 GJD3Q8N144 294 aa8.44□□□□□ -1.06
MCF2-206ENST00000446225 DUOX2Q9NRD8 1548 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 ROCK1Q13464 1354 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 NR1I2O75469 434 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 MAP4K4O95819 1239 aaPredicted RBP8.43□□□□□ -1.06
MCF2-206ENST00000446225 PAK2Q13177 524 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 AGERQ15109 404 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 ZFRQ96KR1 1074 aaKnown RBP8.43□□□□□ -1.06
MCF2-206ENST00000446225 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 FRMD6Q96NE9 622 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 FAN1Q9Y2M0 1017 aa8.43□□□□□ -1.06
MCF2-206ENST00000446225 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.43□□□□□ -1.06
MCF2-206ENST00000446225 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
MCF2-206ENST00000446225 ZBTB39O15060 712 aa8.42□□□□□ -1.06
MCF2-206ENST00000446225 DNAJC6O75061 913 aa8.42□□□□□ -1.06
MCF2-206ENST00000446225 PEX14O75381 377 aa8.42□□□□□ -1.06
MCF2-206ENST00000446225 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms