RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
SEC13-213ENST00000445064 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
SEC13-213ENST00000445064 PPP1R42Q7Z4L9 355 aa20.26■□□□□ 0.83
SEC13-213ENST00000445064 FZD9O00144 591 aa20.25■□□□□ 0.83
SEC13-213ENST00000445064 COL13A1Q5TAT6 717 aaPredicted RBP20.25■□□□□ 0.83
SEC13-213ENST00000445064 C3orf67Q6ZVT6 689 aa20.25■□□□□ 0.83
SEC13-213ENST00000445064 SLC51AQ86UW1 340 aa20.25■□□□□ 0.83
SEC13-213ENST00000445064 RBM17Q96I25 401 aaKnown RBP20.25■□□□□ 0.83
SEC13-213ENST00000445064 PSMD1Q99460 953 aa20.25■□□□□ 0.83
SEC13-213ENST00000445064 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
SEC13-213ENST00000445064 IBTKQ9P2D0 1353 aaPredicted RBP20.24■□□□□ 0.83
SEC13-213ENST00000445064 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
SEC13-213ENST00000445064 PARP10Q53GL7 1025 aa20.24■□□□□ 0.83
SEC13-213ENST00000445064 EAPPQ56P03 285 aaPredicted RBP20.24■□□□□ 0.83
SEC13-213ENST00000445064 CC2D2BQ6DHV5 1058 aa20.24■□□□□ 0.83
SEC13-213ENST00000445064 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
SEC13-213ENST00000445064 JDP2Q8WYK2 163 aa20.24■□□□□ 0.83
SEC13-213ENST00000445064 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
SEC13-213ENST00000445064 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
SEC13-213ENST00000445064 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 LDHDQ86WU2 507 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 SNED1Q8TER0 1413 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 SCN4AP35499 1836 aa20.23■□□□□ 0.83
SEC13-213ENST00000445064 RIC1Q4ADV7 1423 aa20.22■□□□□ 0.83
SEC13-213ENST00000445064 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
SEC13-213ENST00000445064 UTP14AQ9BVJ6 771 aaKnown RBP20.22■□□□□ 0.83
SEC13-213ENST00000445064 CREBZFQ9NS37 354 aa20.22■□□□□ 0.83
SEC13-213ENST00000445064 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
SEC13-213ENST00000445064 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
SEC13-213ENST00000445064 CHL1O00533 1208 aa20.21■□□□□ 0.83
SEC13-213ENST00000445064 PPEF1O14829 653 aaPredicted RBP20.21■□□□□ 0.83
SEC13-213ENST00000445064 EPHX2P34913 555 aa20.21■□□□□ 0.83
SEC13-213ENST00000445064 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
SEC13-213ENST00000445064 XAGE3Q8WTP9 111 aa20.21■□□□□ 0.83
SEC13-213ENST00000445064 MKRN1Q9UHC7 482 aaKnown RBP20.21■□□□□ 0.83
SEC13-213ENST00000445064 HSPA1AP0DMV8 641 aaKnown RBP20.2■□□□□ 0.82
SEC13-213ENST00000445064 HSPA1BP0DMV9 641 aaKnown RBP20.2■□□□□ 0.82
SEC13-213ENST00000445064 WDR43Q15061 677 aaKnown RBP eCLIP20.2■□□□□ 0.82
SEC13-213ENST00000445064 GPC2Q8N158 579 aa20.2■□□□□ 0.82
SEC13-213ENST00000445064 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
SEC13-213ENST00000445064 GJA3Q9Y6H8 435 aa20.2■□□□□ 0.82
SEC13-213ENST00000445064 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
SEC13-213ENST00000445064 EIF6P56537 245 aaKnown RBP20.19■□□□□ 0.82
SEC13-213ENST00000445064 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
SEC13-213ENST00000445064 LARGE2Q8N3Y3 721 aa20.19■□□□□ 0.82
SEC13-213ENST00000445064 PASKQ96RG2 1323 aa20.19■□□□□ 0.82
SEC13-213ENST00000445064 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
SEC13-213ENST00000445064 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
SEC13-213ENST00000445064 NLRP10Q86W26 655 aa20.18■□□□□ 0.82
SEC13-213ENST00000445064 ZNF428Q96B54 188 aa20.18■□□□□ 0.82
SEC13-213ENST00000445064 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.823e-7■■■□□ 17.1
SEC13-213ENST00000445064 COL4A5P29400 1685 aa20.18■□□□□ 0.82
SEC13-213ENST00000445064 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
SEC13-213ENST00000445064 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
SEC13-213ENST00000445064 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
SEC13-213ENST00000445064 TMX4Q9H1E5 349 aaPredicted RBP20.16■□□□□ 0.82
SEC13-213ENST00000445064 CHPF2Q9P2E5 772 aa20.16■□□□□ 0.82
SEC13-213ENST00000445064 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
SEC13-213ENST00000445064 ATP6V0A2Q9Y487 856 aa20.16■□□□□ 0.82
SEC13-213ENST00000445064 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
SEC13-213ENST00000445064 ABCC4O15439 1325 aa20.15■□□□□ 0.82
SEC13-213ENST00000445064 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
SEC13-213ENST00000445064 PPIP5K2O43314 1243 aa20.14■□□□□ 0.81
SEC13-213ENST00000445064 AOC3Q16853 763 aa20.14■□□□□ 0.81
SEC13-213ENST00000445064 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
SEC13-213ENST00000445064 NIM1KQ8IY84 436 aa20.14■□□□□ 0.81
SEC13-213ENST00000445064 BBOX1O75936 387 aa20.13■□□□□ 0.81
SEC13-213ENST00000445064 EPS15P42566 896 aa20.13■□□□□ 0.81
SEC13-213ENST00000445064 SH3TC1Q8TE82 1336 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
SEC13-213ENST00000445064 SCNN1DP51172 638 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 ANKRD13DQ6ZTN6 518 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 SP8Q8IXZ3 490 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 PRKRIP1Q9H875 184 aaPredicted RBP20.12■□□□□ 0.81
SEC13-213ENST00000445064 ADAMTSL1Q8N6G6 1762 aa20.12■□□□□ 0.81
SEC13-213ENST00000445064 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
SEC13-213ENST00000445064 CNTNAP1P78357 1384 aa20.11■□□□□ 0.81
SEC13-213ENST00000445064 DDX46Q7L014 1031 aaKnown RBP20.11■□□□□ 0.81
SEC13-213ENST00000445064 PLBD2Q8NHP8 589 aa20.11■□□□□ 0.81
SEC13-213ENST00000445064 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
SEC13-213ENST00000445064 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
SEC13-213ENST00000445064 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
SEC13-213ENST00000445064 VEGFBP49765 207 aa20.1■□□□□ 0.81
SEC13-213ENST00000445064 DUSP27Q5VZP5 1158 aa20.1■□□□□ 0.81
SEC13-213ENST00000445064 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
SEC13-213ENST00000445064 MPNDQ8N594 471 aa20.1■□□□□ 0.81
SEC13-213ENST00000445064 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
SEC13-213ENST00000445064 RTFDC1Q9BY42 306 aaPredicted RBP20.1■□□□□ 0.81
SEC13-213ENST00000445064 LAMB2P55268 1798 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 ATP5J2-PTCD1G3V325 749 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 HOXB7P09629 217 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 GRAPQ13588 217 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
SEC13-213ENST00000445064 FAM89AQ96GI7 184 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
SEC13-213ENST00000445064 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms