RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 DDNO94850 711 aaPredicted RBP18.19■□□□□ 0.5
TREX1-202ENST00000444177 NTSR2O95665 410 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
TREX1-202ENST00000444177 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 XAGE3Q8WTP9 111 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
TREX1-202ENST00000444177 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
TREX1-202ENST00000444177 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
TREX1-202ENST00000444177 ARFGEF2Q9Y6D5 1785 aa18.19■□□□□ 0.5
TREX1-202ENST00000444177 GNAI1P63096 354 aa18.18■□□□□ 0.5
TREX1-202ENST00000444177 HTRA3P83110 453 aa18.18■□□□□ 0.5
TREX1-202ENST00000444177 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
TREX1-202ENST00000444177 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
TREX1-202ENST00000444177 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
TREX1-202ENST00000444177 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
TREX1-202ENST00000444177 TIAM2Q8IVF5 1701 aa18.18■□□□□ 0.5
TREX1-202ENST00000444177 SLC10A5Q5PT55 438 aa18.17■□□□□ 0.5
TREX1-202ENST00000444177 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 HSP90AB3PQ58FF7 597 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 CC2D2BQ6DHV5 1058 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
TREX1-202ENST00000444177 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 CRAMP1Q96RY5 1269 aa18.16■□□□□ 0.5
TREX1-202ENST00000444177 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 HOXB7P09629 217 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 TCIRG1Q13488 830 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 CHPF2Q9P2E5 772 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
TREX1-202ENST00000444177 WDR90Q96KV7 1748 aa18.15■□□□□ 0.5
TREX1-202ENST00000444177 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
TREX1-202ENST00000444177 NLRP10Q86W26 655 aa18.14■□□□□ 0.49
TREX1-202ENST00000444177 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
TREX1-202ENST00000444177 PSMD1Q99460 953 aa18.14■□□□□ 0.49
TREX1-202ENST00000444177 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
TREX1-202ENST00000444177 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
TREX1-202ENST00000444177 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
TREX1-202ENST00000444177 GRIPAP1Q4V328 841 aa18.12■□□□□ 0.49
TREX1-202ENST00000444177 KLRG1Q96E93 195 aa18.12■□□□□ 0.49
TREX1-202ENST00000444177 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
TREX1-202ENST00000444177 IQCA1LA6NCM1 817 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 FZD9O00144 591 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
TREX1-202ENST00000444177 PPEF1O14829 653 aaPredicted RBP18.11■□□□□ 0.49
TREX1-202ENST00000444177 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
TREX1-202ENST00000444177 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 ANKRD13DQ6ZTN6 518 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 TSR2Q969E8 191 aaKnown RBP18.11■□□□□ 0.49
TREX1-202ENST00000444177 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
TREX1-202ENST00000444177 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 SNED1Q8TER0 1413 aa18.11■□□□□ 0.49
TREX1-202ENST00000444177 ANKRD36CQ5JPF3 1778 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 POTEIP0CG38 1075 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 POTEJP0CG39 1038 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 SLC51AQ86UW1 340 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 JDP2Q8WYK2 163 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
TREX1-202ENST00000444177 HYPKQ9NX55 129 aa18.1■□□□□ 0.49
TREX1-202ENST00000444177 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
TREX1-202ENST00000444177 IL16Q14005 1332 aa18.08■□□□□ 0.49
TREX1-202ENST00000444177 SH3TC1Q8TE82 1336 aa18.08■□□□□ 0.49
TREX1-202ENST00000444177 BBOX1O75936 387 aa18.08■□□□□ 0.48
TREX1-202ENST00000444177 DIEXFQ68CQ4 756 aaKnown RBP18.08■□□□□ 0.48
TREX1-202ENST00000444177 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
TREX1-202ENST00000444177 ZNF428Q96B54 188 aa18.08■□□□□ 0.48
TREX1-202ENST00000444177 ISCA1Q9BUE6 129 aa18.08■□□□□ 0.48
TREX1-202ENST00000444177 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
TREX1-202ENST00000444177 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
TREX1-202ENST00000444177 ABCC4O15439 1325 aa18.07■□□□□ 0.48
TREX1-202ENST00000444177 GPC2Q8N158 579 aa18.07■□□□□ 0.48
TREX1-202ENST00000444177 LARGE2Q8N3Y3 721 aa18.07■□□□□ 0.48
TREX1-202ENST00000444177 JMYQ8N9B5 988 aa18.07■□□□□ 0.48
TREX1-202ENST00000444177 HACL1Q9UJ83 578 aa18.07■□□□□ 0.48
TREX1-202ENST00000444177 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
TREX1-202ENST00000444177 EIF6P56537 245 aaKnown RBP18.06■□□□□ 0.48
TREX1-202ENST00000444177 LDHDQ86WU2 507 aa18.06■□□□□ 0.48
TREX1-202ENST00000444177 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
TREX1-202ENST00000444177 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
TREX1-202ENST00000444177 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
TREX1-202ENST00000444177 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
TREX1-202ENST00000444177 FAM89AQ96GI7 184 aa18.05■□□□□ 0.48
TREX1-202ENST00000444177 EPHX2P34913 555 aa18.04■□□□□ 0.48
TREX1-202ENST00000444177 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
TREX1-202ENST00000444177 EAPPQ56P03 285 aaPredicted RBP18.04■□□□□ 0.48
TREX1-202ENST00000444177 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
TREX1-202ENST00000444177 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
TREX1-202ENST00000444177 GJA3Q9Y6H8 435 aa18.04■□□□□ 0.48
TREX1-202ENST00000444177 SCN4AP35499 1836 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 GRAPQ13588 217 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 RIC3Q7Z5B4 369 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms