RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
PMPCB-203ENST00000443722 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
PMPCB-203ENST00000443722 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.35
PMPCB-203ENST00000443722 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
PMPCB-203ENST00000443722 HOXB7P09629 217 aa17.21■□□□□ 0.34
PMPCB-203ENST00000443722 ALDH1B1P30837 517 aa17.21■□□□□ 0.34
PMPCB-203ENST00000443722 TCIRG1Q13488 830 aa17.21■□□□□ 0.34
PMPCB-203ENST00000443722 PARP10Q53GL7 1025 aa17.21■□□□□ 0.34
PMPCB-203ENST00000443722 SOGA3Q5TF21 947 aa17.21■□□□□ 0.34
PMPCB-203ENST00000443722 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.34
PMPCB-203ENST00000443722 DBF4Q9UBU7 674 aaPredicted RBP17.21■□□□□ 0.34
PMPCB-203ENST00000443722 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.34
PMPCB-203ENST00000443722 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
PMPCB-203ENST00000443722 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
PMPCB-203ENST00000443722 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
PMPCB-203ENST00000443722 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
PMPCB-203ENST00000443722 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
PMPCB-203ENST00000443722 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
PMPCB-203ENST00000443722 LTBP3Q9NS15 1303 aa17.19■□□□□ 0.34
PMPCB-203ENST00000443722 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
PMPCB-203ENST00000443722 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
PMPCB-203ENST00000443722 CALD1Q05682 793 aaKnown RBP17.19■□□□□ 0.34
PMPCB-203ENST00000443722 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
PMPCB-203ENST00000443722 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 POTECB2RU33 542 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-203ENST00000443722 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
PMPCB-203ENST00000443722 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
PMPCB-203ENST00000443722 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
PMPCB-203ENST00000443722 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 HYPKQ9NX55 129 aa17.18■□□□□ 0.34
PMPCB-203ENST00000443722 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
PMPCB-203ENST00000443722 HTRA3P83110 453 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
PMPCB-203ENST00000443722 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
PMPCB-203ENST00000443722 RIC1Q4ADV7 1423 aa17.15■□□□□ 0.34
PMPCB-203ENST00000443722 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
PMPCB-203ENST00000443722 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
PMPCB-203ENST00000443722 CRAMP1Q96RY5 1269 aa17.15■□□□□ 0.34
PMPCB-203ENST00000443722 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
PMPCB-203ENST00000443722 ABCC4O15439 1325 aa17.14■□□□□ 0.33
PMPCB-203ENST00000443722 SH3TC1Q8TE82 1336 aa17.14■□□□□ 0.33
PMPCB-203ENST00000443722 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
PMPCB-203ENST00000443722 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
PMPCB-203ENST00000443722 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
PMPCB-203ENST00000443722 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
PMPCB-203ENST00000443722 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
PMPCB-203ENST00000443722 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
PMPCB-203ENST00000443722 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
PMPCB-203ENST00000443722 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
PMPCB-203ENST00000443722 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
PMPCB-203ENST00000443722 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
PMPCB-203ENST00000443722 MYD88Q99836 296 aa17.12■□□□□ 0.33
PMPCB-203ENST00000443722 APLP1P51693 650 aa17.11■□□□□ 0.33
PMPCB-203ENST00000443722 FSTL1Q12841 308 aa17.11■□□□□ 0.33
PMPCB-203ENST00000443722 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
PMPCB-203ENST00000443722 PSMD1Q99460 953 aa17.11■□□□□ 0.33
PMPCB-203ENST00000443722 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
PMPCB-203ENST00000443722 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
PMPCB-203ENST00000443722 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
PMPCB-203ENST00000443722 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
PMPCB-203ENST00000443722 COL4A5P29400 1685 aa17.1■□□□□ 0.33
PMPCB-203ENST00000443722 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
PMPCB-203ENST00000443722 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
PMPCB-203ENST00000443722 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
PMPCB-203ENST00000443722 G2E3Q7L622 706 aa17.09■□□□□ 0.33
PMPCB-203ENST00000443722 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
PMPCB-203ENST00000443722 FZD9O00144 591 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
PMPCB-203ENST00000443722 AOC3Q16853 763 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
PMPCB-203ENST00000443722 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
PMPCB-203ENST00000443722 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
PMPCB-203ENST00000443722 BBOX1O75936 387 aa17.07■□□□□ 0.32
PMPCB-203ENST00000443722 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
PMPCB-203ENST00000443722 GRAPQ13588 217 aa17.07■□□□□ 0.32
PMPCB-203ENST00000443722 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
PMPCB-203ENST00000443722 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
PMPCB-203ENST00000443722 CELF1Q92879 486 aaKnown RBP17.07■□□□□ 0.32
PMPCB-203ENST00000443722 WDR90Q96KV7 1748 aa17.07■□□□□ 0.32
PMPCB-203ENST00000443722 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
PMPCB-203ENST00000443722 PPIP5K2O43314 1243 aa17.06■□□□□ 0.32
PMPCB-203ENST00000443722 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
PMPCB-203ENST00000443722 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
PMPCB-203ENST00000443722 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
PMPCB-203ENST00000443722 IL16Q14005 1332 aa17.06■□□□□ 0.32
PMPCB-203ENST00000443722 COL4A1P02462 1669 aa17.05■□□□□ 0.32
PMPCB-203ENST00000443722 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
PMPCB-203ENST00000443722 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
PMPCB-203ENST00000443722 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms