RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 COL26A1Q96A83 441 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 IGHA1P01876 353 aa8.52□□□□□ -1.05
AC003001.1-201ENST00000443247 GRIN2CQ14957 1233 aa8.52□□□□□ -1.05
AC003001.1-201ENST00000443247 C11orf91Q3C1V1 193 aa8.52□□□□□ -1.05
AC003001.1-201ENST00000443247 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
AC003001.1-201ENST00000443247 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
AC003001.1-201ENST00000443247 ARAFP10398 606 aa8.51□□□□□ -1.05
AC003001.1-201ENST00000443247 SCNN1AP37088 669 aa8.51□□□□□ -1.05
AC003001.1-201ENST00000443247 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
AC003001.1-201ENST00000443247 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
AC003001.1-201ENST00000443247 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
AC003001.1-201ENST00000443247 SSFA2P28290 1259 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 IDH3AP50213 366 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 EDARADDQ8WWZ3 215 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 IFT43Q96FT9 208 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 SEPT3Q9UH03 358 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 GGA1Q9UJY5 639 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
AC003001.1-201ENST00000443247 KCNQ4P56696 695 aa8.49□□□□□ -1.05
AC003001.1-201ENST00000443247 SLCO4C1Q6ZQN7 724 aa8.49□□□□□ -1.05
AC003001.1-201ENST00000443247 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
AC003001.1-201ENST00000443247 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
AC003001.1-201ENST00000443247 NEURL1BA8MQ27 555 aa8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 MICAL2O94851 1124 aa8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 PODNQ7Z5L7 613 aa8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 BEND7Q8N7W2 519 aaPredicted RBP8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 SLC30A3Q99726 388 aa8.48□□□□□ -1.05
AC003001.1-201ENST00000443247 PHF20L1A8MW92 1017 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 SHISA8B8ZZ34 492 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 TNFRSF10BO14763 440 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 ITGB2P05107 769 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 ADH6P28332 368 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 INPP5BP32019 993 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 ARSDP51689 593 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 KLF15Q9UIH9 416 aa8.47□□□□□ -1.05
AC003001.1-201ENST00000443247 EPXP11678 715 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 EPB42P16452 691 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 FAM26DQ5JW98 314 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 DCAF5Q96JK2 942 aa8.46□□□□□ -1.06
AC003001.1-201ENST00000443247 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
AC003001.1-201ENST00000443247 PLA2G4EQ3MJ16 856 aa8.45□□□□□ -1.06
AC003001.1-201ENST00000443247 OPLAHO14841 1288 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 BHMTQ93088 406 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 STIM2Q9P246 746 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 USP20Q9Y2K6 914 aa8.44□□□□□ -1.06
AC003001.1-201ENST00000443247 AMPD1P23109 780 aa8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 HELQQ8TDG4 1101 aa8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 GTF3C2Q8WUA4 911 aaPredicted RBP8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 BTBD6Q96KE9 485 aa8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
AC003001.1-201ENST00000443247 SIN3BO75182 1162 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 SNRPNP63162 240 aaKnown RBP8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 PNMA5Q96PV4 448 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 GSX2Q9BZM3 304 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 MKL2Q9ULH7 1088 aa8.42□□□□□ -1.06
AC003001.1-201ENST00000443247 ZAP70P43403 619 aa8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 PDE4CQ08493 712 aa8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 CCINQ13939 588 aa8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
AC003001.1-201ENST00000443247 MSTNO14793 375 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 ZBTB39O15060 712 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 PROCP04070 461 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 NFKB1P19838 968 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 MTMR3Q13615 1198 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 KRT25Q7Z3Z0 450 aa8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
AC003001.1-201ENST00000443247 ABL1P00519 1130 aa8.39□□□□□ -1.07
AC003001.1-201ENST00000443247 HOXB4P17483 251 aaPredicted RBP8.39□□□□□ -1.07
AC003001.1-201ENST00000443247 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
AC003001.1-201ENST00000443247 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
AC003001.1-201ENST00000443247 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 XYLBO75191 536 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 MPSTP25325 297 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 ZNF211Q13398 564 aaPredicted RBP8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 CHSY3Q70JA7 882 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 ATCAYQ86WG3 371 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
AC003001.1-201ENST00000443247 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms