RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
HMGB3P22-201ENST00000442010 ALDH1B1P30837 517 aa24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 TCIRG1Q13488 830 aa24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 NCBP3Q53F19 620 aaKnown RBP24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 HSP90AB3PQ58FF7 597 aa24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 SNED1Q8TER0 1413 aa24.57■■□□□ 1.52
HMGB3P22-201ENST00000442010 CCDC93Q567U6 631 aa24.56■■□□□ 1.52
HMGB3P22-201ENST00000442010 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
HMGB3P22-201ENST00000442010 NLRP10Q86W26 655 aa24.56■■□□□ 1.52
HMGB3P22-201ENST00000442010 UTP14AQ9BVJ6 771 aaKnown RBP24.56■■□□□ 1.52
HMGB3P22-201ENST00000442010 GLTPD2A6NH11 291 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 TOMM70O94826 608 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 OLFM4Q6UX06 510 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 WWC1Q8IX03 1113 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 C8orf58Q8NAV2 365 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 PLBD2Q8NHP8 589 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 HYPKQ9NX55 129 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 RNF123Q5XPI4 1314 aa24.55■■□□□ 1.52
HMGB3P22-201ENST00000442010 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
HMGB3P22-201ENST00000442010 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
HMGB3P22-201ENST00000442010 WDR90Q96KV7 1748 aa24.54■■□□□ 1.52
HMGB3P22-201ENST00000442010 ELL2O00472 640 aaPredicted RBP24.53■■□□□ 1.52
HMGB3P22-201ENST00000442010 RRAGCQ9HB90 399 aa24.53■■□□□ 1.52
HMGB3P22-201ENST00000442010 CRAMP1Q96RY5 1269 aa24.52■■□□□ 1.52
HMGB3P22-201ENST00000442010 ISCA1Q9BUE6 129 aa24.52■■□□□ 1.52
HMGB3P22-201ENST00000442010 FKBP4Q02790 459 aaKnown RBP eCLIP24.51■■□□□ 1.51
HMGB3P22-201ENST00000442010 RPGRQ92834 1020 aaKnown RBP24.51■■□□□ 1.51
HMGB3P22-201ENST00000442010 TAF1P21675 1872 aa24.51■■□□□ 1.51
HMGB3P22-201ENST00000442010 HSPA6P17066 643 aa24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 SYNE4Q8N205 404 aa24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 TSPYL6Q8N831 410 aa24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 RBM17Q96I25 401 aaKnown RBP24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 NLRP3Q96P20 1036 aa24.5■■□□□ 1.51
HMGB3P22-201ENST00000442010 RBM46Q8TBY0 533 aaKnown RBP24.49■■□□□ 1.51
HMGB3P22-201ENST00000442010 TSR2Q969E8 191 aaKnown RBP24.49■■□□□ 1.51
HMGB3P22-201ENST00000442010 PHAXQ9H814 394 aaKnown RBP24.49■■□□□ 1.51
HMGB3P22-201ENST00000442010 CEP350Q5VT06 3117 aa24.48■■□□□ 1.51
HMGB3P22-201ENST00000442010 POTECB2RU33 542 aa24.48■■□□□ 1.51
HMGB3P22-201ENST00000442010 CACNA1FO60840 1977 aa24.48■■□□□ 1.51
HMGB3P22-201ENST00000442010 IL16Q14005 1332 aa24.48■■□□□ 1.51
HMGB3P22-201ENST00000442010 TRMT112Q9UI30 125 aaKnown RBP24.48■■□□□ 1.51
HMGB3P22-201ENST00000442010 SH3TC1Q8TE82 1336 aa24.47■■□□□ 1.51
HMGB3P22-201ENST00000442010 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
HMGB3P22-201ENST00000442010 HCLS1P14317 486 aaPredicted RBP24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 TRIM28Q13263 835 aaKnown RBP24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 DPY19L2Q6NUT2 758 aa24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 SLC51AQ86UW1 340 aa24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 PSMD1Q99460 953 aa24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 ZNF277Q9NRM2 450 aaPredicted RBP24.46■■□□□ 1.51
HMGB3P22-201ENST00000442010 ATP5J2-PTCD1G3V325 749 aa24.45■■□□□ 1.5
HMGB3P22-201ENST00000442010 VEGFAP15692 232 aaPredicted RBP24.45■■□□□ 1.5
HMGB3P22-201ENST00000442010 CCDC30Q5VVM6 783 aa24.45■■□□□ 1.5
HMGB3P22-201ENST00000442010 ABCC4O15439 1325 aa24.44■■□□□ 1.5
HMGB3P22-201ENST00000442010 C16orf71Q8IYS4 520 aaPredicted RBP24.44■■□□□ 1.5
HMGB3P22-201ENST00000442010 SCN4AP35499 1836 aa24.43■■□□□ 1.5
HMGB3P22-201ENST00000442010 PPEF1O14829 653 aaPredicted RBP24.43■■□□□ 1.5
HMGB3P22-201ENST00000442010 ZNF428Q96B54 188 aa24.43■■□□□ 1.5
HMGB3P22-201ENST00000442010 CHMP4AQ9BY43 222 aa24.43■■□□□ 1.5
HMGB3P22-201ENST00000442010 COL4A5P29400 1685 aa24.43■■□□□ 1.5
HMGB3P22-201ENST00000442010 IARSP41252 1262 aaKnown RBP24.42■■□□□ 1.5
HMGB3P22-201ENST00000442010 GOLGA2Q08379 1002 aa24.42■■□□□ 1.5
HMGB3P22-201ENST00000442010 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
HMGB3P22-201ENST00000442010 RIC3Q7Z5B4 369 aa24.42■■□□□ 1.5
HMGB3P22-201ENST00000442010 WDR63Q8IWG1 891 aa24.42■■□□□ 1.5
HMGB3P22-201ENST00000442010 DDNO94850 711 aaPredicted RBP24.41■■□□□ 1.5
HMGB3P22-201ENST00000442010 FSTL1Q12841 308 aa24.41■■□□□ 1.5
HMGB3P22-201ENST00000442010 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
HMGB3P22-201ENST00000442010 ATP6V0A2Q9Y487 856 aa24.41■■□□□ 1.5
HMGB3P22-201ENST00000442010 TWISTNBQ3B726 338 aaPredicted RBP24.4■■□□□ 1.5
HMGB3P22-201ENST00000442010 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
HMGB3P22-201ENST00000442010 FANCIQ9NVI1 1328 aa24.39■■□□□ 1.5
HMGB3P22-201ENST00000442010 FZD9O00144 591 aa24.39■■□□□ 1.49
HMGB3P22-201ENST00000442010 FAM9BQ8IZU0 186 aa24.39■■□□□ 1.49
HMGB3P22-201ENST00000442010 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.49
HMGB3P22-201ENST00000442010 ZNF541Q9H0D2 1346 aa24.38■■□□□ 1.49
HMGB3P22-201ENST00000442010 COL4A1P02462 1669 aa24.38■■□□□ 1.49
HMGB3P22-201ENST00000442010 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
HMGB3P22-201ENST00000442010 BBOX1O75936 387 aa24.38■■□□□ 1.49
HMGB3P22-201ENST00000442010 SF3B3Q15393 1217 aaKnown RBP24.38■■□□□ 1.49
HMGB3P22-201ENST00000442010 GRAPQ13588 217 aa24.37■■□□□ 1.49
HMGB3P22-201ENST00000442010 GRAPLQ8TC17 118 aaPredicted RBP24.37■■□□□ 1.49
HMGB3P22-201ENST00000442010 L3MBTL3Q96JM7 780 aaPredicted RBP24.37■■□□□ 1.49
HMGB3P22-201ENST00000442010 MYD88Q99836 296 aa24.37■■□□□ 1.49
HMGB3P22-201ENST00000442010 METTL22Q9BUU2 404 aaPredicted RBP24.37■■□□□ 1.49
HMGB3P22-201ENST00000442010 APLP1P51693 650 aa24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 DDX46Q7L014 1031 aaKnown RBP24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 SMC1BQ8NDV3 1235 aa24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 SPINK5Q9NQ38 1064 aaPredicted RBP24.36■■□□□ 1.49
HMGB3P22-201ENST00000442010 DDX58O95786 925 aaKnown RBP24.35■■□□□ 1.49
HMGB3P22-201ENST00000442010 KSR2Q6VAB6 950 aa24.35■■□□□ 1.49
HMGB3P22-201ENST00000442010 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
HMGB3P22-201ENST00000442010 RTFDC1Q9BY42 306 aaPredicted RBP24.35■■□□□ 1.49
HMGB3P22-201ENST00000442010 IRS4O14654 1257 aaPredicted RBP24.34■■□□□ 1.49
HMGB3P22-201ENST00000442010 RTL5Q5HYW3 569 aaPredicted RBP24.34■■□□□ 1.49
HMGB3P22-201ENST00000442010 G2E3Q7L622 706 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms