RNA–Protein interactions for RNA: ENST00000440812.7

SMG7-205, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 1,190 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-205ENST00000440812 KRT24Q2M2I5 525 aa27.47■■□□□ 1.99
SMG7-205ENST00000440812 GIGYF2Q6Y7W6 1299 aaKnown RBP27.47■■□□□ 1.99
SMG7-205ENST00000440812 RIC1Q4ADV7 1423 aa27.47■■□□□ 1.99
SMG7-205ENST00000440812 LTBP1Q14766 1721 aa27.47■■□□□ 1.99
SMG7-205ENST00000440812 IBTKQ9P2D0 1353 aaPredicted RBP27.47■■□□□ 1.99
SMG7-205ENST00000440812 ERBB4Q15303 1308 aa27.46■■□□□ 1.99
SMG7-205ENST00000440812 SYNE4Q8N205 404 aa27.46■■□□□ 1.99
SMG7-205ENST00000440812 RTKN2Q8IZC4 609 aa27.45■■□□□ 1.98
SMG7-205ENST00000440812 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
SMG7-205ENST00000440812 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
SMG7-205ENST00000440812 CHADLQ6NUI6 762 aa27.44■■□□□ 1.98
SMG7-205ENST00000440812 RPGRQ92834 1020 aaKnown RBP27.44■■□□□ 1.98
SMG7-205ENST00000440812 L3MBTL3Q96JM7 780 aaPredicted RBP27.42■■□□□ 1.98
SMG7-205ENST00000440812 TRIM35Q9UPQ4 493 aa27.42■■□□□ 1.98
SMG7-205ENST00000440812 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
SMG7-205ENST00000440812 HOXA10P31260 410 aaPredicted RBP27.41■■□□□ 1.98
SMG7-205ENST00000440812 LMOD3Q0VAK6 560 aa27.41■■□□□ 1.98
SMG7-205ENST00000440812 AIMP1Q12904 312 aaKnown RBP27.41■■□□□ 1.98
SMG7-205ENST00000440812 ZNF428Q96B54 188 aa27.41■■□□□ 1.98
SMG7-205ENST00000440812 TAF1DQ9H5J8 278 aaPredicted RBP27.41■■□□□ 1.98
SMG7-205ENST00000440812 TRPM7Q96QT4 1865 aa27.39■■□□□ 1.98
SMG7-205ENST00000440812 COPS6Q7L5N1 327 aa27.39■■□□□ 1.98
SMG7-205ENST00000440812 PPP1R42Q7Z4L9 355 aa27.39■■□□□ 1.98
SMG7-205ENST00000440812 XAGE3Q8WTP9 111 aa27.39■■□□□ 1.98
SMG7-205ENST00000440812 BABAM1Q9NWV8 329 aa27.39■■□□□ 1.98
SMG7-205ENST00000440812 RNF123Q5XPI4 1314 aa27.39■■□□□ 1.97
SMG7-205ENST00000440812 IQCA1LA6NCM1 817 aa27.38■■□□□ 1.97
SMG7-205ENST00000440812 FZD9O00144 591 aa27.38■■□□□ 1.97
SMG7-205ENST00000440812 RUNDC1Q96C34 613 aa27.38■■□□□ 1.97
SMG7-205ENST00000440812 PSMD1Q99460 953 aa27.38■■□□□ 1.97
SMG7-205ENST00000440812 ADAMTS8Q9UP79 889 aa27.38■■□□□ 1.97
SMG7-205ENST00000440812 PPEF1O14829 653 aaPredicted RBP27.37■■□□□ 1.97
SMG7-205ENST00000440812 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMG7-205ENST00000440812 EAPPQ56P03 285 aaPredicted RBP27.37■■□□□ 1.97
SMG7-205ENST00000440812 RBM17Q96I25 401 aaKnown RBP27.37■■□□□ 1.97
SMG7-205ENST00000440812 CHL1O00533 1208 aa27.36■■□□□ 1.97
SMG7-205ENST00000440812 PARP10Q53GL7 1025 aa27.36■■□□□ 1.97
SMG7-205ENST00000440812 CRAMP1Q96RY5 1269 aa27.36■■□□□ 1.97
SMG7-205ENST00000440812 UTP14AQ9BVJ6 771 aaKnown RBP27.36■■□□□ 1.97
SMG7-205ENST00000440812 COL13A1Q5TAT6 717 aaPredicted RBP27.35■■□□□ 1.97
SMG7-205ENST00000440812 LDHDQ86WU2 507 aa27.35■■□□□ 1.97
SMG7-205ENST00000440812 NLRP3Q96P20 1036 aa27.34■■□□□ 1.97
SMG7-205ENST00000440812 CHPF2Q9P2E5 772 aa27.34■■□□□ 1.97
SMG7-205ENST00000440812 MKRN1Q9UHC7 482 aaKnown RBP27.34■■□□□ 1.97
SMG7-205ENST00000440812 HACL1Q9UJ83 578 aa27.34■■□□□ 1.97
SMG7-205ENST00000440812 COL4A1P02462 1669 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 LRRC37AA6NMS7 1700 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 EPHX2P34913 555 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 CC2D2BQ6DHV5 1058 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 GJA3Q9Y6H8 435 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 ABCC4O15439 1325 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 PASKQ96RG2 1323 aa27.33■■□□□ 1.97
SMG7-205ENST00000440812 HCLS1P14317 486 aaPredicted RBP27.32■■□□□ 1.96
SMG7-205ENST00000440812 SLC10A5Q5PT55 438 aa27.32■■□□□ 1.96
SMG7-205ENST00000440812 JDP2Q8WYK2 163 aa27.32■■□□□ 1.96
SMG7-205ENST00000440812 DDX21Q9NR30 783 aaKnown RBP eCLIP27.32■■□□□ 1.96
SMG7-205ENST00000440812 HSPA1AP0DMV8 641 aaKnown RBP27.31■■□□□ 1.96
SMG7-205ENST00000440812 HSPA1BP0DMV9 641 aaKnown RBP27.31■■□□□ 1.96
SMG7-205ENST00000440812 CREBZFQ9NS37 354 aa27.31■■□□□ 1.96
SMG7-205ENST00000440812 CLEC11AQ9Y240 323 aa27.31■■□□□ 1.96
SMG7-205ENST00000440812 POLR2AP24928 1970 aaKnown RBP27.31■■□□□ 1.96
SMG7-205ENST00000440812 GPC2Q8N158 579 aa27.3■■□□□ 1.96
SMG7-205ENST00000440812 LARGE2Q8N3Y3 721 aa27.3■■□□□ 1.96
SMG7-205ENST00000440812 ITGBL1O95965 494 aaPredicted RBP27.29■■□□□ 1.96
SMG7-205ENST00000440812 TCIRG1Q13488 830 aa27.29■■□□□ 1.96
SMG7-205ENST00000440812 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
SMG7-205ENST00000440812 EIF6P56537 245 aaKnown RBP27.28■■□□□ 1.96
SMG7-205ENST00000440812 HSP90AB3PQ58FF7 597 aa27.28■■□□□ 1.96
SMG7-205ENST00000440812 HDGFL1Q5TGJ6 251 aa27.28■■□□□ 1.96
SMG7-205ENST00000440812 AOC3Q16853 763 aa27.27■■□□□ 1.96
SMG7-205ENST00000440812 MAP1SQ66K74 1059 aaPredicted RBP27.27■■□□□ 1.96
SMG7-205ENST00000440812 TRMT112Q9UI30 125 aaKnown RBP27.27■■□□□ 1.96
SMG7-205ENST00000440812 ATP6V0A2Q9Y487 856 aa27.27■■□□□ 1.96
SMG7-205ENST00000440812 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.96
SMG7-205ENST00000440812 SPEF2Q9C093 1822 aa27.26■■□□□ 1.95
SMG7-205ENST00000440812 PPIP5K2O43314 1243 aa27.25■■□□□ 1.95
SMG7-205ENST00000440812 MBIPQ9NS73 344 aa27.25■■□□□ 1.95
SMG7-205ENST00000440812 MYH3P11055 1940 aa27.24■■□□□ 1.95
SMG7-205ENST00000440812 EPS15P42566 896 aa27.24■■□□□ 1.95
SMG7-205ENST00000440812 SCNN1DP51172 638 aa27.24■■□□□ 1.95
SMG7-205ENST00000440812 CNTNAP1P78357 1384 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 SH3TC1Q8TE82 1336 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 ATP5J2-PTCD1G3V325 749 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 GRIPAP1Q4V328 841 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 DUSP27Q5VZP5 1158 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 NIM1KQ8IY84 436 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 CFAP44Q96MT7 982 aa27.23■■□□□ 1.95
SMG7-205ENST00000440812 APAF1O14727 1248 aa27.22■■□□□ 1.95
SMG7-205ENST00000440812 PNMA8AQ86V59 439 aaPredicted RBP27.22■■□□□ 1.95
SMG7-205ENST00000440812 CNTROBQ8N137 903 aa27.22■■□□□ 1.95
SMG7-205ENST00000440812 PLBD2Q8NHP8 589 aa27.22■■□□□ 1.95
SMG7-205ENST00000440812 TMEM88BA6NKF7 163 aa27.21■■□□□ 1.95
SMG7-205ENST00000440812 FMR1Q06787 632 aaKnown RBP eCLIP27.21■■□□□ 1.95
SMG7-205ENST00000440812 ANKRD13DQ6ZTN6 518 aa27.21■■□□□ 1.95
SMG7-205ENST00000440812 DBF4Q9UBU7 674 aaPredicted RBP27.21■■□□□ 1.95
SMG7-205ENST00000440812 SCN9AQ15858 1988 aa27.2■■□□□ 1.95
SMG7-205ENST00000440812 LMOD1P29536 600 aaPredicted RBP27.2■■□□□ 1.94
SMG7-205ENST00000440812 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
SMG7-205ENST00000440812 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms