RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 GNAI2P04899 355 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 CAMK4Q16566 473 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 STX1AQ16623 288 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
LINC02048-201ENST00000440556 C10orf67Q8IYJ2 551 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
LINC02048-201ENST00000440556 AGLP35573 1532 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 YTHDC2Q9H6S0 1430 aaKnown RBP16.09■□□□□ 0.17
LINC02048-201ENST00000440556 PREX1Q8TCU6 1659 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 VPS37CA5D8V6 355 aaPredicted RBP16.09■□□□□ 0.17
LINC02048-201ENST00000440556 SGSM2O43147 1006 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
LINC02048-201ENST00000440556 MAGEA9P43362 315 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 DNAJC25Q9H1X3 360 aa16.09■□□□□ 0.17
LINC02048-201ENST00000440556 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
LINC02048-201ENST00000440556 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.17
LINC02048-201ENST00000440556 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.17
LINC02048-201ENST00000440556 ACTN2P35609 894 aa16.08■□□□□ 0.17
LINC02048-201ENST00000440556 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.17
LINC02048-201ENST00000440556 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.17
LINC02048-201ENST00000440556 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.17
LINC02048-201ENST00000440556 PLEKHG2Q9H7P9 1386 aa16.08■□□□□ 0.16
LINC02048-201ENST00000440556 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
LINC02048-201ENST00000440556 RPS6KA5O75582 802 aa16.08■□□□□ 0.16
LINC02048-201ENST00000440556 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.16
LINC02048-201ENST00000440556 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
LINC02048-201ENST00000440556 CCDC83Q8IWF9 413 aa16.08■□□□□ 0.16
LINC02048-201ENST00000440556 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
LINC02048-201ENST00000440556 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.16
LINC02048-201ENST00000440556 SLC52A1Q9NWF4 448 aa16.08■□□□□ 0.16
LINC02048-201ENST00000440556 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.16
LINC02048-201ENST00000440556 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
LINC02048-201ENST00000440556 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 TTC41PQ6P2S7 1318 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 BECN2A8MW95 431 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 GNAI3P08754 354 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 PSEN1P49768 467 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
LINC02048-201ENST00000440556 LEKR1Q6ZMV7 388 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 ZNF622Q969S3 477 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC02048-201ENST00000440556 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
LINC02048-201ENST00000440556 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 ITSN1Q15811 1721 aa16.07■□□□□ 0.16
LINC02048-201ENST00000440556 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 MSL3Q8N5Y2 521 aaKnown RBP16.06■□□□□ 0.16
LINC02048-201ENST00000440556 GPR161Q8N6U8 529 aaKnown RBP16.06■□□□□ 0.16
LINC02048-201ENST00000440556 KCNB2Q92953 911 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
LINC02048-201ENST00000440556 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
LINC02048-201ENST00000440556 LRRFIP1Q32MZ4 808 aaKnown RBP16.05■□□□□ 0.16
LINC02048-201ENST00000440556 TMEM132EQ6IEE7 984 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
LINC02048-201ENST00000440556 RUFY2Q8WXA3 655 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 MKRN1Q9UHC7 482 aaKnown RBP16.05■□□□□ 0.16
LINC02048-201ENST00000440556 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 NPHP1O15259 732 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 ETF1P62495 437 aaKnown RBP16.05■□□□□ 0.16
LINC02048-201ENST00000440556 ST5P78524 1137 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
LINC02048-201ENST00000440556 PPM1EQ8WY54 764 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
LINC02048-201ENST00000440556 SOX12O15370 315 aa16.04■□□□□ 0.16
LINC02048-201ENST00000440556 TADA3O75528 432 aa16.04■□□□□ 0.16
LINC02048-201ENST00000440556 ANKRD1Q15327 319 aa16.04■□□□□ 0.16
LINC02048-201ENST00000440556 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
LINC02048-201ENST00000440556 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
LINC02048-201ENST00000440556 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
LINC02048-201ENST00000440556 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
LINC02048-201ENST00000440556 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
LINC02048-201ENST00000440556 CRYBG1Q9Y4K1 1723 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 TRIM66O15016 1216 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 TBC1D8O95759 1140 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
LINC02048-201ENST00000440556 CC2D1AQ6P1N0 951 aaPredicted RBP16.03■□□□□ 0.16
LINC02048-201ENST00000440556 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
LINC02048-201ENST00000440556 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 EXOC6BQ9Y2D4 811 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 CHL1O00533 1208 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 ATP2B1P20020 1258 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 IL13P35225 146 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
LINC02048-201ENST00000440556 SWT1Q5T5J6 900 aaKnown RBP16.03■□□□□ 0.16
LINC02048-201ENST00000440556 CCDC91Q7Z6B0 441 aa16.03■□□□□ 0.16
LINC02048-201ENST00000440556 REXO1L1PQ8IX06 675 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms