RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SUSD4Q5VX71 490 aa18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CENPQQ7L2Z9 268 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ADCY9O60503 1353 aa18.38■□□□□ 0.53
TNFRSF1A-204ENST00000440083 FLIIQ13045 1269 aa18.37■□□□□ 0.53
TNFRSF1A-204ENST00000440083 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
TNFRSF1A-204ENST00000440083 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-204ENST00000440083 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
TNFRSF1A-204ENST00000440083 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NPHP1O15259 732 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CACNA1FO60840 1977 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 COL11A2P13942 1736 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 TRIM27P14373 513 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 DPEP1P16444 411 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 CHRNA5P30532 468 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 TNRC6CQ9HCJ0 1690 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 TNNQ9UQP3 1299 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
TNFRSF1A-204ENST00000440083 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NTSR2O95665 410 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 RLBP1P12271 317 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 MYD88Q99836 296 aa18.35■□□□□ 0.53
TNFRSF1A-204ENST00000440083 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 FKBP5Q13451 457 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ERFEQ4G0M1 354 aa18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 DDX19BQ9UMR2 479 aa18.34■□□□□ 0.53
TNFRSF1A-204ENST00000440083 ST5P78524 1137 aa18.33■□□□□ 0.52
TNFRSF1A-204ENST00000440083 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
TNFRSF1A-204ENST00000440083 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
TNFRSF1A-204ENST00000440083 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.52
TNFRSF1A-204ENST00000440083 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 F6X3S4 739 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 TGFB2P61812 414 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 PARP10Q53GL7 1025 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 TPTE2Q6XPS3 522 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 METTL22Q9BUU2 404 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-204ENST00000440083 KCNA3P22001 575 aa18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 GTF2E1P29083 439 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 C3orf67Q6ZVT6 689 aa18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 NYXQ9GZU5 481 aa18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-204ENST00000440083 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 IGKV5-2P06315 115 aa18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-204ENST00000440083 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-204ENST00000440083 RTL5Q5HYW3 569 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-204ENST00000440083 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-204ENST00000440083 PDE6BP35913 854 aa18.28■□□□□ 0.52
TNFRSF1A-204ENST00000440083 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-204ENST00000440083 ABCC4O15439 1325 aa18.27■□□□□ 0.52
TNFRSF1A-204ENST00000440083 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1A-204ENST00000440083 GPR162Q16538 588 aa18.27■□□□□ 0.52
TNFRSF1A-204ENST00000440083 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
TNFRSF1A-204ENST00000440083 LAMB2P55268 1798 aa18.27■□□□□ 0.51
TNFRSF1A-204ENST00000440083 PTPRCP08575 1304 aa18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 H0YIN7 160 aa18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-204ENST00000440083 CACNA1SQ13698 1873 aa18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 RWDD1Q9H446 243 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
TNFRSF1A-204ENST00000440083 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-204ENST00000440083 SRGNP10124 158 aa18.24■□□□□ 0.51
TNFRSF1A-204ENST00000440083 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
TNFRSF1A-204ENST00000440083 DALRD3Q5D0E6 543 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-204ENST00000440083 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
TNFRSF1A-204ENST00000440083 BEND3Q5T5X7 828 aa18.23■□□□□ 0.51
TNFRSF1A-204ENST00000440083 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-204ENST00000440083 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
TNFRSF1A-204ENST00000440083 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-204ENST00000440083 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-204ENST00000440083 CRY2Q49AN0 593 aa18.22■□□□□ 0.51
TNFRSF1A-204ENST00000440083 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
TNFRSF1A-204ENST00000440083 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-204ENST00000440083 GOLGB1Q14789 3259 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms