RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 PPP1R42Q7Z4L9 355 aa21.57■■□□□ 1.04
TARDBP-203ENST00000439080 NUTM1Q86Y26 1132 aa21.56■■□□□ 1.04
TARDBP-203ENST00000439080 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
TARDBP-203ENST00000439080 PTPRCP08575 1304 aa21.56■■□□□ 1.04
TARDBP-203ENST00000439080 MYH3P11055 1940 aa21.56■■□□□ 1.04
TARDBP-203ENST00000439080 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
TARDBP-203ENST00000439080 GTF2E1P29083 439 aaPredicted RBP21.55■■□□□ 1.04
TARDBP-203ENST00000439080 NEXNQ0ZGT2 675 aa21.55■■□□□ 1.04
TARDBP-203ENST00000439080 UTP14AQ9BVJ6 771 aaKnown RBP21.55■■□□□ 1.04
TARDBP-203ENST00000439080 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
TARDBP-203ENST00000439080 UTRNP46939 3433 aa21.55■■□□□ 1.04
TARDBP-203ENST00000439080 F6X3S4 739 aa21.54■■□□□ 1.04
TARDBP-203ENST00000439080 TGFB2P61812 414 aa21.54■■□□□ 1.04
TARDBP-203ENST00000439080 ERFEQ4G0M1 354 aa21.54■■□□□ 1.04
TARDBP-203ENST00000439080 BRIP1Q9BX63 1249 aa21.54■■□□□ 1.04
TARDBP-203ENST00000439080 IGKV5-2P06315 115 aa21.53■■□□□ 1.04
TARDBP-203ENST00000439080 TRIM28Q13263 835 aaKnown RBP21.53■■□□□ 1.04
TARDBP-203ENST00000439080 KIF16BQ96L93 1317 aa21.53■■□□□ 1.04
TARDBP-203ENST00000439080 DPEP1P16444 411 aa21.52■■□□□ 1.04
TARDBP-203ENST00000439080 CHRNA5P30532 468 aa21.52■■□□□ 1.04
TARDBP-203ENST00000439080 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
TARDBP-203ENST00000439080 CCDC191Q8NCU4 936 aa21.52■■□□□ 1.04
TARDBP-203ENST00000439080 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
TARDBP-203ENST00000439080 TRMT112Q9UI30 125 aaKnown RBP21.52■■□□□ 1.04
TARDBP-203ENST00000439080 SH3TC1Q8TE82 1336 aa21.51■■□□□ 1.03
TARDBP-203ENST00000439080 A0A0G2JLW4 131 aa21.51■■□□□ 1.03
TARDBP-203ENST00000439080 PDE6BP35913 854 aa21.51■■□□□ 1.03
TARDBP-203ENST00000439080 CWF19L2Q2TBE0 894 aaKnown RBP21.51■■□□□ 1.03
TARDBP-203ENST00000439080 NEURL1BA8MQ27 555 aa21.5■■□□□ 1.03
TARDBP-203ENST00000439080 C2CD5Q86YS7 1000 aa21.5■■□□□ 1.03
TARDBP-203ENST00000439080 BCAR3O75815 825 aa21.49■■□□□ 1.03
TARDBP-203ENST00000439080 WWC3Q9ULE0 1092 aa21.49■■□□□ 1.03
TARDBP-203ENST00000439080 NOB1Q9ULX3 412 aaKnown RBP21.49■■□□□ 1.03
TARDBP-203ENST00000439080 SLC4A10Q6U841 1118 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 LINS1Q8NG48 757 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 H0YIN7 160 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 KCNA3P22001 575 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
TARDBP-203ENST00000439080 BEND3Q5T5X7 828 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 ZBTB38Q8NAP3 1195 aaPredicted RBP21.48■■□□□ 1.03
TARDBP-203ENST00000439080 FAM89AQ96GI7 184 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
TARDBP-203ENST00000439080 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
TARDBP-203ENST00000439080 TAF1P21675 1872 aa21.46■■□□□ 1.03
TARDBP-203ENST00000439080 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-203ENST00000439080 PCCAP05165 728 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-203ENST00000439080 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
TARDBP-203ENST00000439080 GCKRQ14397 625 aa21.46■■□□□ 1.03
TARDBP-203ENST00000439080 C3orf67Q6ZVT6 689 aa21.46■■□□□ 1.03
TARDBP-203ENST00000439080 PELP1Q8IZL8 1130 aaKnown RBP21.46■■□□□ 1.03
TARDBP-203ENST00000439080 SRGNP10124 158 aa21.45■■□□□ 1.02
TARDBP-203ENST00000439080 CRY2Q49AN0 593 aa21.45■■□□□ 1.02
TARDBP-203ENST00000439080 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.02
TARDBP-203ENST00000439080 API5Q9BZZ5 524 aaKnown RBP21.45■■□□□ 1.02
TARDBP-203ENST00000439080 IRS4O14654 1257 aaPredicted RBP21.44■■□□□ 1.02
TARDBP-203ENST00000439080 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
TARDBP-203ENST00000439080 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
TARDBP-203ENST00000439080 SRCIN1Q9C0H9 1055 aa21.44■■□□□ 1.02
TARDBP-203ENST00000439080 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
TARDBP-203ENST00000439080 SPEF2Q9C093 1822 aa21.44■■□□□ 1.02
TARDBP-203ENST00000439080 CDHR2Q9BYE9 1310 aa21.43■■□□□ 1.02
TARDBP-203ENST00000439080 YBX3P16989 372 aaKnown RBP eCLIP21.43■■□□□ 1.02
TARDBP-203ENST00000439080 UBE3BQ7Z3V4 1068 aa21.43■■□□□ 1.02
TARDBP-203ENST00000439080 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
TARDBP-203ENST00000439080 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.023e-23■□□□□ 9.1
TARDBP-203ENST00000439080 MASTLQ96GX5 879 aa21.43■■□□□ 1.02
TARDBP-203ENST00000439080 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
TARDBP-203ENST00000439080 ALDH1L1O75891 902 aa21.42■■□□□ 1.02
TARDBP-203ENST00000439080 NPR1P16066 1061 aa21.42■■□□□ 1.02
TARDBP-203ENST00000439080 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
TARDBP-203ENST00000439080 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
TARDBP-203ENST00000439080 BCS1LQ9Y276 419 aa21.42■■□□□ 1.02
TARDBP-203ENST00000439080 ABCC4O15439 1325 aa21.41■■□□□ 1.02
TARDBP-203ENST00000439080 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
TARDBP-203ENST00000439080 TRIM27P14373 513 aa21.41■■□□□ 1.02
TARDBP-203ENST00000439080 GPR162Q16538 588 aa21.41■■□□□ 1.02
TARDBP-203ENST00000439080 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
TARDBP-203ENST00000439080 RCAN3Q9UKA8 241 aa21.41■■□□□ 1.02
TARDBP-203ENST00000439080 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
TARDBP-203ENST00000439080 COL4A1P02462 1669 aa21.4■■□□□ 1.02
TARDBP-203ENST00000439080 H7C1W4 665 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 GRM8O00222 908 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 HSP90B1P14625 803 aaKnown RBP21.39■■□□□ 1.02
TARDBP-203ENST00000439080 CASP7P55210 303 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 ZKSCAN2Q63HK3 967 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 TTLL6Q8N841 843 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 CNKSR1Q969H4 720 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 TNNQ9UQP3 1299 aa21.39■■□□□ 1.02
TARDBP-203ENST00000439080 CHD4Q14839 1912 aa21.39■■□□□ 1.01
TARDBP-203ENST00000439080 LRRC37AA6NMS7 1700 aa21.39■■□□□ 1.01
TARDBP-203ENST00000439080 FER1L6Q2WGJ9 1857 aa21.39■■□□□ 1.01
TARDBP-203ENST00000439080 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
TARDBP-203ENST00000439080 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
TARDBP-203ENST00000439080 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
TARDBP-203ENST00000439080 PDE8AO60658 829 aa21.37■■□□□ 1.01
TARDBP-203ENST00000439080 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
TARDBP-203ENST00000439080 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
TARDBP-203ENST00000439080 RBM17Q96I25 401 aaKnown RBP21.36■■□□□ 1.01
TARDBP-203ENST00000439080 CTSWP56202 376 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms