RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 ZBTB39O15060 712 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 ERCC3P19447 782 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 TNP2Q05952 138 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 TYRO3Q06418 890 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 EHHADHQ08426 723 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 PDE3BQ13370 1112 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 GTPBP3Q969Y2 492 aaKnown RBP6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 EFCC1Q9HA90 598 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 PODXL2Q9NZ53 605 aa6.66□□□□□ -1.34
LSM1P1-201ENST00000438629 EFSO43281 561 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 BNIP3LO60238 219 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 MAPTP10636 758 aaKnown RBP6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 MAPK1P28482 360 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 GPR152Q8TDT2 470 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 MARK1Q9P0L2 795 aa6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 RTCBQ9Y3I0 505 aaKnown RBP6.65□□□□□ -1.34
LSM1P1-201ENST00000438629 H3BM21 787 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 TERTO14746 1132 aaKnown RBP6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 FZD6O60353 706 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 NEFLP07196 543 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 NEUROD1Q13562 356 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 FAM26DQ5JW98 314 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 FAM182BQ5T319 152 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 RGL4Q8IZJ4 473 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 CMTR1Q8N1G2 835 aaKnown RBP6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 EDEM1Q92611 657 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 KLRG1Q96E93 195 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 RBCK1Q9BYM8 510 aa6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 NSFL1CQ9UNZ2 370 aaKnown RBP6.64□□□□□ -1.35
LSM1P1-201ENST00000438629 EGFRP00533 1210 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 PDGFAP04085 211 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 THBS1P07996 1170 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 IRF7Q92985 503 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 NUDT16Q96DE0 195 aaKnown RBP6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 ABHD17AQ96GS6 310 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 POLIQ9UNA4 740 aa6.63□□□□□ -1.35
LSM1P1-201ENST00000438629 DCDC2BA2VCK2 349 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 VSIG8P0DPA2 414 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 FGFR3P22607 806 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 MFAP1P55081 439 aaKnown RBP6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 SFSWAPQ12872 951 aaKnown RBP6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 CCINQ13939 588 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 PDE12Q6L8Q7 609 aaKnown RBP6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 XKR5Q6UX68 686 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 CCDC87Q9NVE4 849 aa6.62□□□□□ -1.35
LSM1P1-201ENST00000438629 UBAP1LF5GYI3 381 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 XYLBO75191 536 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 C8orf34Q49A92 452 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 GJD3Q8N144 294 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 ASB16Q96NS5 453 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 PRR12Q9ULL5 1215 aa6.61□□□□□ -1.35
LSM1P1-201ENST00000438629 MX2P20592 715 aa6.6□□□□□ -1.35
LSM1P1-201ENST00000438629 GSX2Q9BZM3 304 aa6.6□□□□□ -1.35
LSM1P1-201ENST00000438629 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
LSM1P1-201ENST00000438629 GPR25O00155 361 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 BMP4P12644 408 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 CD33P20138 364 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 MAP2K3P46734 347 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 VEGFBP49765 207 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 PLCB3Q01970 1234 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 NLRP13Q86W25 1043 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 PMEPA1Q969W9 287 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 GGNBP2Q9H3C7 697 aa6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 AVENQ9NQS1 362 aaPredicted RBP6.59□□□□□ -1.35
LSM1P1-201ENST00000438629 FGD1P98174 961 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 CTBSQ01459 385 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 NFX1Q12986 1120 aaKnown RBP6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 TTC39BQ5VTQ0 682 aaPredicted RBP6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 MBIPQ9NS73 344 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 USP20Q9Y2K6 914 aa6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.58□□□□□ -1.36
LSM1P1-201ENST00000438629 ANKRD33BA6NCL7 494 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 SASH3O75995 380 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 PCSK7Q16549 785 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 TMC7Q7Z402 723 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 GPR161Q8N6U8 529 aaKnown RBP6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 ELP3Q9H9T3 547 aa6.57□□□□□ -1.36
LSM1P1-201ENST00000438629 TREHO43280 583 aa6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 DNAJC14Q6Y2X3 702 aaPredicted RBP6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 COL25A1Q9BXS0 654 aaPredicted RBP6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 ABI2Q9NYB9 513 aaPredicted RBP6.56□□□□□ -1.36
LSM1P1-201ENST00000438629 WFS1O76024 890 aa6.55□□□□□ -1.36
LSM1P1-201ENST00000438629 PSAPP07602 524 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms