RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 KRT24Q2M2I5 525 aa18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
TNFRSF1A-203ENST00000437813 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
TNFRSF1A-203ENST00000437813 POTEJP0CG39 1038 aa18.92■□□□□ 0.62
TNFRSF1A-203ENST00000437813 SLC10A5Q5PT55 438 aa18.92■□□□□ 0.62
TNFRSF1A-203ENST00000437813 PSMD1Q99460 953 aa18.92■□□□□ 0.62
TNFRSF1A-203ENST00000437813 ZNF541Q9H0D2 1346 aa18.92■□□□□ 0.62
TNFRSF1A-203ENST00000437813 FZD9O00144 591 aa18.91■□□□□ 0.62
TNFRSF1A-203ENST00000437813 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-203ENST00000437813 PARP10Q53GL7 1025 aa18.91■□□□□ 0.62
TNFRSF1A-203ENST00000437813 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
TNFRSF1A-203ENST00000437813 CRAMP1Q96RY5 1269 aa18.91■□□□□ 0.62
TNFRSF1A-203ENST00000437813 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-203ENST00000437813 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-203ENST00000437813 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
TNFRSF1A-203ENST00000437813 SYNE4Q8N205 404 aa18.89■□□□□ 0.61
TNFRSF1A-203ENST00000437813 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
TNFRSF1A-203ENST00000437813 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
TNFRSF1A-203ENST00000437813 COPS6Q7L5N1 327 aa18.88■□□□□ 0.61
TNFRSF1A-203ENST00000437813 TAF1DQ9H5J8 278 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1A-203ENST00000437813 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
TNFRSF1A-203ENST00000437813 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
TNFRSF1A-203ENST00000437813 CHADLQ6NUI6 762 aa18.87■□□□□ 0.61
TNFRSF1A-203ENST00000437813 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
TNFRSF1A-203ENST00000437813 XAGE3Q8WTP9 111 aa18.87■□□□□ 0.61
TNFRSF1A-203ENST00000437813 LTBP1Q14766 1721 aa18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 HOXB7P09629 217 aa18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 RPGRQ92834 1020 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 CFAP44Q96MT7 982 aa18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 UTP14AQ9BVJ6 771 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-203ENST00000437813 PASKQ96RG2 1323 aa18.85■□□□□ 0.61
TNFRSF1A-203ENST00000437813 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
TNFRSF1A-203ENST00000437813 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
TNFRSF1A-203ENST00000437813 NECTIN2Q92692 538 aa18.85■□□□□ 0.61
TNFRSF1A-203ENST00000437813 CHPF2Q9P2E5 772 aa18.85■□□□□ 0.61
TNFRSF1A-203ENST00000437813 TAF1P21675 1872 aa18.84■□□□□ 0.61
TNFRSF1A-203ENST00000437813 GRIPAP1Q4V328 841 aa18.84■□□□□ 0.61
TNFRSF1A-203ENST00000437813 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-203ENST00000437813 LRRC37AA6NMS7 1700 aa18.83■□□□□ 0.61
TNFRSF1A-203ENST00000437813 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 ITGBL1O95965 494 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 LDHDQ86WU2 507 aa18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 GPC2Q8N158 579 aa18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 NLRP3Q96P20 1036 aa18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
TNFRSF1A-203ENST00000437813 ABCC4O15439 1325 aa18.82■□□□□ 0.6
TNFRSF1A-203ENST00000437813 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-203ENST00000437813 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
TNFRSF1A-203ENST00000437813 ATP6V0A2Q9Y487 856 aa18.82■□□□□ 0.6
TNFRSF1A-203ENST00000437813 COL4A1P02462 1669 aa18.82■□□□□ 0.6
TNFRSF1A-203ENST00000437813 DUOX1Q9NRD9 1551 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 HDGFL1Q5TGJ6 251 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 RTFDC1Q9BY42 306 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 HACL1Q9UJ83 578 aa18.81■□□□□ 0.6
TNFRSF1A-203ENST00000437813 APAF1O14727 1248 aa18.8■□□□□ 0.6
TNFRSF1A-203ENST00000437813 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-203ENST00000437813 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
TNFRSF1A-203ENST00000437813 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-203ENST00000437813 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-203ENST00000437813 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
TNFRSF1A-203ENST00000437813 EPHX2P34913 555 aa18.79■□□□□ 0.6
TNFRSF1A-203ENST00000437813 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
TNFRSF1A-203ENST00000437813 SCNN1DP51172 638 aa18.78■□□□□ 0.6
TNFRSF1A-203ENST00000437813 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
TNFRSF1A-203ENST00000437813 VPS33BQ9H267 617 aa18.78■□□□□ 0.6
TNFRSF1A-203ENST00000437813 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
TNFRSF1A-203ENST00000437813 TRMT112Q9UI30 125 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-203ENST00000437813 BBOX1O75936 387 aa18.77■□□□□ 0.6
TNFRSF1A-203ENST00000437813 TRIM28Q13263 835 aaKnown RBP18.77■□□□□ 0.6
TNFRSF1A-203ENST00000437813 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
TNFRSF1A-203ENST00000437813 SP8Q8IXZ3 490 aa18.77■□□□□ 0.6
TNFRSF1A-203ENST00000437813 HYPKQ9NX55 129 aa18.77■□□□□ 0.6
TNFRSF1A-203ENST00000437813 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-203ENST00000437813 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
TNFRSF1A-203ENST00000437813 GRAPQ13588 217 aa18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 AOC3Q16853 763 aa18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 COL13A1Q5TAT6 717 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 PNMA8AQ86V59 439 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 GRAPLQ8TC17 118 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 CNTNAP1P78357 1384 aa18.75■□□□□ 0.59
TNFRSF1A-203ENST00000437813 EPS15P42566 896 aa18.74■□□□□ 0.59
TNFRSF1A-203ENST00000437813 EIF6P56537 245 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-203ENST00000437813 SF3B3Q15393 1217 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-203ENST00000437813 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-203ENST00000437813 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 GNAI1P63096 354 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 KIAA2012Q0VF49 1180 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
TNFRSF1A-203ENST00000437813 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms