RNA–Protein interactions for RNA: ENST00000436539.1

AP006285.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP006285.1, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006285.1-201ENST00000436539 MYD88Q99836 296 aa13.65□□□□□ -0.22
AP006285.1-201ENST00000436539 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
AP006285.1-201ENST00000436539 LAMB2P55268 1798 aa13.65□□□□□ -0.22
AP006285.1-201ENST00000436539 PTPRCP08575 1304 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 F6X3S4 739 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 BRPF1P55201 1214 aaPredicted RBP13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 TGFB2P61812 414 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 NUTM1Q86Y26 1132 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 BRIP1Q9BX63 1249 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
AP006285.1-201ENST00000436539 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 DPEP1P16444 411 aa13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
AP006285.1-201ENST00000436539 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 NEURL1BA8MQ27 555 aa13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 CHRNA5P30532 468 aa13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 PDE6BP35913 854 aa13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
AP006285.1-201ENST00000436539 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
AP006285.1-201ENST00000436539 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
AP006285.1-201ENST00000436539 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
AP006285.1-201ENST00000436539 LINS1Q8NG48 757 aa13.61□□□□□ -0.23
AP006285.1-201ENST00000436539 PDZRN3Q9UPQ7 1066 aa13.61□□□□□ -0.23
AP006285.1-201ENST00000436539 H0YIN7 160 aa13.6□□□□□ -0.23
AP006285.1-201ENST00000436539 KCNA3P22001 575 aa13.6□□□□□ -0.23
AP006285.1-201ENST00000436539 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
AP006285.1-201ENST00000436539 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
AP006285.1-201ENST00000436539 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 BCAR3O75815 825 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 PCCAP05165 728 aaPredicted RBP13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 SRGNP10124 158 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 CRY2Q49AN0 593 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 SLC10A5Q5PT55 438 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 API5Q9BZZ5 524 aaKnown RBP13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
AP006285.1-201ENST00000436539 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 IRS4O14654 1257 aaPredicted RBP13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 GCKRQ14397 625 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
AP006285.1-201ENST00000436539 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 YBX3P16989 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 SRCIN1Q9C0H9 1055 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 ABCC4O15439 1325 aa13.57□□□□□ -0.24
AP006285.1-201ENST00000436539 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 NPR1P16066 1061 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 RCAN3Q9UKA8 241 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 MYH3P11055 1940 aa13.56□□□□□ -0.24
AP006285.1-201ENST00000436539 H7C1W4 665 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 GRM8O00222 908 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 TRIM27P14373 513 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 GPR162Q16538 588 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 FRAT1Q92837 279 aaPredicted RBP13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
AP006285.1-201ENST00000436539 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 CASP7P55210 303 aa13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 PRPF40BQ6NWY9 871 aaKnown RBP13.54□□□□□ -0.24
AP006285.1-201ENST00000436539 GOLGB1Q14789 3259 aaKnown RBP13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 PDE8AO60658 829 aa13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 CTSWP56202 376 aa13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 SF3B3Q15393 1217 aaKnown RBP13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 TNNQ9UQP3 1299 aa13.53□□□□□ -0.24
AP006285.1-201ENST00000436539 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
AP006285.1-201ENST00000436539 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
AP006285.1-201ENST00000436539 CRAMP1Q96RY5 1269 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms