RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 RPGRQ92834 1020 aaKnown RBP24.34■■□□□ 1.49
UBXN1-203ENST00000436354 ABCC12Q96J65 1359 aa24.33■■□□□ 1.49
UBXN1-203ENST00000436354 NEFMP07197 916 aa24.33■■□□□ 1.49
UBXN1-203ENST00000436354 GRIPAP1Q4V328 841 aa24.33■■□□□ 1.49
UBXN1-203ENST00000436354 MAP3K15Q6ZN16 1313 aa24.33■■□□□ 1.48
UBXN1-203ENST00000436354 HOXA10P31260 410 aaPredicted RBP24.32■■□□□ 1.48
UBXN1-203ENST00000436354 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
UBXN1-203ENST00000436354 GJA3Q9Y6H8 435 aa24.32■■□□□ 1.48
UBXN1-203ENST00000436354 LMOD1P29536 600 aaPredicted RBP24.31■■□□□ 1.48
UBXN1-203ENST00000436354 RIC1Q4ADV7 1423 aa24.31■■□□□ 1.48
UBXN1-203ENST00000436354 ABT1Q9ULW3 272 aaKnown RBP24.31■■□□□ 1.48
UBXN1-203ENST00000436354 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
UBXN1-203ENST00000436354 KDM3BQ7LBC6 1761 aa24.31■■□□□ 1.48
UBXN1-203ENST00000436354 IBTKQ9P2D0 1353 aaPredicted RBP24.3■■□□□ 1.48
UBXN1-203ENST00000436354 DLG5Q8TDM6 1919 aa24.3■■□□□ 1.48
UBXN1-203ENST00000436354 LBX1P52954 281 aa24.3■■□□□ 1.48
UBXN1-203ENST00000436354 MAP2K1Q02750 393 aaPredicted RBP24.29■■□□□ 1.48
UBXN1-203ENST00000436354 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
UBXN1-203ENST00000436354 WDR33Q9C0J8 1336 aaKnown RBP24.29■■□□□ 1.48
UBXN1-203ENST00000436354 GPTP24298 496 aa24.28■■□□□ 1.48
UBXN1-203ENST00000436354 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
UBXN1-203ENST00000436354 LARGE2Q8N3Y3 721 aa24.28■■□□□ 1.48
UBXN1-203ENST00000436354 RBM17Q96I25 401 aaKnown RBP24.28■■□□□ 1.48
UBXN1-203ENST00000436354 CRAMP1Q96RY5 1269 aa24.28■■□□□ 1.48
UBXN1-203ENST00000436354 COL4A5P29400 1685 aa24.27■■□□□ 1.48
UBXN1-203ENST00000436354 MYL6BP14649 208 aa24.27■■□□□ 1.48
UBXN1-203ENST00000436354 EIF4A1P60842 406 aaKnown RBP24.27■■□□□ 1.48
UBXN1-203ENST00000436354 ZBTB3Q9H5J0 574 aa24.27■■□□□ 1.48
UBXN1-203ENST00000436354 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
UBXN1-203ENST00000436354 SUSD4Q5VX71 490 aa24.26■■□□□ 1.47
UBXN1-203ENST00000436354 LTBP1Q14766 1721 aa24.26■■□□□ 1.47
UBXN1-203ENST00000436354 PPEF1O14829 653 aaPredicted RBP24.25■■□□□ 1.47
UBXN1-203ENST00000436354 SCNN1DP51172 638 aa24.25■■□□□ 1.47
UBXN1-203ENST00000436354 ZNF34Q8IZ26 560 aa24.25■■□□□ 1.47
UBXN1-203ENST00000436354 HSPA8P11142 646 aaKnown RBP24.24■■□□□ 1.47
UBXN1-203ENST00000436354 EPS15P42566 896 aa24.24■■□□□ 1.47
UBXN1-203ENST00000436354 USP50Q70EL3 339 aaPredicted RBP24.24■■□□□ 1.47
UBXN1-203ENST00000436354 NIM1KQ8IY84 436 aa24.24■■□□□ 1.47
UBXN1-203ENST00000436354 GIGYF2Q6Y7W6 1299 aaKnown RBP24.23■■□□□ 1.47
UBXN1-203ENST00000436354 PPP1R42Q7Z4L9 355 aa24.23■■□□□ 1.47
UBXN1-203ENST00000436354 TMX4Q9H1E5 349 aaPredicted RBP24.23■■□□□ 1.47
UBXN1-203ENST00000436354 ERBB4Q15303 1308 aa24.23■■□□□ 1.47
UBXN1-203ENST00000436354 TCERG1O14776 1098 aaKnown RBP24.22■■□□□ 1.47
UBXN1-203ENST00000436354 NTSR2O95665 410 aa24.22■■□□□ 1.47
UBXN1-203ENST00000436354 ECE1P42892 770 aa24.22■■□□□ 1.47
UBXN1-203ENST00000436354 NFE2L2Q16236 605 aa24.21■■□□□ 1.47
UBXN1-203ENST00000436354 PARP10Q53GL7 1025 aa24.21■■□□□ 1.47
UBXN1-203ENST00000436354 NLRP3Q96P20 1036 aa24.21■■□□□ 1.47
UBXN1-203ENST00000436354 VPS33BQ9H267 617 aa24.21■■□□□ 1.47
UBXN1-203ENST00000436354 TRPM7Q96QT4 1865 aa24.21■■□□□ 1.47
UBXN1-203ENST00000436354 PPIP5K2O43314 1243 aa24.2■■□□□ 1.46
UBXN1-203ENST00000436354 PAXIP1Q6ZW49 1069 aaPredicted RBP24.2■■□□□ 1.46
UBXN1-203ENST00000436354 CAPNS2Q96L46 248 aa24.2■■□□□ 1.46
UBXN1-203ENST00000436354 PLEKHF1Q96S99 279 aa24.2■■□□□ 1.46
UBXN1-203ENST00000436354 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
UBXN1-203ENST00000436354 BEGAINQ9BUH8 593 aa24.2■■□□□ 1.46
UBXN1-203ENST00000436354 THSD7BQ9C0I4 1608 aa24.2■■□□□ 1.46
UBXN1-203ENST00000436354 FMR1Q06787 632 aaKnown RBP eCLIP24.19■■□□□ 1.46
UBXN1-203ENST00000436354 C3orf67Q6ZVT6 689 aa24.19■■□□□ 1.46
UBXN1-203ENST00000436354 ABHD8Q96I13 439 aa24.19■■□□□ 1.46
UBXN1-203ENST00000436354 PNNQ9H307 717 aaKnown RBP24.19■■□□□ 1.46
UBXN1-203ENST00000436354 ATP6V0A2Q9Y487 856 aa24.19■■□□□ 1.46
UBXN1-203ENST00000436354 SLC51AQ86UW1 340 aa24.18■■□□□ 1.46
UBXN1-203ENST00000436354 SUPT20HQ8NEM7 779 aa24.18■■□□□ 1.46
UBXN1-203ENST00000436354 ADARB2Q9NS39 739 aaKnown RBP24.18■■□□□ 1.46
UBXN1-203ENST00000436354 AOC3Q16853 763 aa24.17■■□□□ 1.46
UBXN1-203ENST00000436354 SLC10A5Q5PT55 438 aa24.17■■□□□ 1.46
UBXN1-203ENST00000436354 CST9Q5W186 159 aa24.17■■□□□ 1.46
UBXN1-203ENST00000436354 GPR101Q96P66 508 aaPredicted RBP24.17■■□□□ 1.46
UBXN1-203ENST00000436354 GPRC5DQ9NZD1 345 aa24.17■■□□□ 1.46
UBXN1-203ENST00000436354 MAPK8IP3Q9UPT6 1336 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 TRAF5O00463 557 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 GRM1Q13255 1194 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 CYP4F22Q6NT55 531 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 UTP14AQ9BVJ6 771 aaKnown RBP24.16■■□□□ 1.46
UBXN1-203ENST00000436354 ZNRF3Q9ULT6 936 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 TLL2Q9Y6L7 1015 aa24.16■■□□□ 1.46
UBXN1-203ENST00000436354 CXCL9Q07325 125 aa24.14■■□□□ 1.45
UBXN1-203ENST00000436354 RTFDC1Q9BY42 306 aaPredicted RBP24.14■■□□□ 1.45
UBXN1-203ENST00000436354 TSPYL4Q9UJ04 414 aa24.14■■□□□ 1.45
UBXN1-203ENST00000436354 ABCC4O15439 1325 aa24.13■■□□□ 1.45
UBXN1-203ENST00000436354 BBOX1O75936 387 aa24.13■■□□□ 1.45
UBXN1-203ENST00000436354 LRP10Q7Z4F1 713 aa24.13■■□□□ 1.45
UBXN1-203ENST00000436354 EIF2S2P20042 333 aaKnown RBP24.12■■□□□ 1.45
UBXN1-203ENST00000436354 MAP2K2P36507 400 aa24.12■■□□□ 1.45
UBXN1-203ENST00000436354 PDIA6Q15084 440 aa24.12■■□□□ 1.45
UBXN1-203ENST00000436354 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
UBXN1-203ENST00000436354 SP8Q8IXZ3 490 aa24.12■■□□□ 1.45
UBXN1-203ENST00000436354 CDHR2Q9BYE9 1310 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 GMPSP49915 693 aaPredicted RBP24.1■■□□□ 1.45
UBXN1-203ENST00000436354 HSP90AB3PQ58FF7 597 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 CIAPIN1Q6FI81 312 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 MPNDQ8N594 471 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 LAMB2P55268 1798 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 ANKRD36CQ5JPF3 1778 aa24.1■■□□□ 1.45
UBXN1-203ENST00000436354 ZNF316A6NFI3 1004 aaPredicted RBP24.09■■□□□ 1.45
UBXN1-203ENST00000436354 CELF2O95319 508 aaKnown RBP24.09■■□□□ 1.45
UBXN1-203ENST00000436354 KIAA2012Q0VF49 1180 aa24.09■■□□□ 1.45
UBXN1-203ENST00000436354 SAPCD2Q86UD0 394 aa24.09■■□□□ 1.45
UBXN1-203ENST00000436354 BABAM1Q9NWV8 329 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms