RNA–Protein interactions for RNA: ENST00000435539.1

AL441943.1-201, humanhuman

TSL 3 BASIC

Gene AL441943.1, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.1-201ENST00000435539 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
AL441943.1-201ENST00000435539 CCDC9Q9Y3X0 531 aaKnown RBP10.85□□□□□ -0.67
AL441943.1-201ENST00000435539 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
AL441943.1-201ENST00000435539 COL18A1P39060 1754 aa10.85□□□□□ -0.67
AL441943.1-201ENST00000435539 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 PEAK1Q9H792 1746 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 NWD2Q9ULI1 1742 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 APBB1O00213 710 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 EXOC5O00471 708 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 USP17L8P0C7I0 530 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 NFE2L2Q16236 605 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 AFF2P51816 1311 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
AL441943.1-201ENST00000435539 APAF1O14727 1248 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 TMPOP42166 694 aaKnown RBP10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 RIPK4P57078 832 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 AKAP4Q5JQC9 854 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 WDR63Q8IWG1 891 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 MTMR14Q8NCE2 650 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 TSC1Q92574 1164 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 WNT2BQ93097 391 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 QTRT2Q9H974 415 aaKnown RBP10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
AL441943.1-201ENST00000435539 BCL9LQ86UU0 1499 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 GNAT3A8MTJ3 354 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 BCAMP50895 628 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 PPP4CP60510 307 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 IFNL2Q8IZJ0 200 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
AL441943.1-201ENST00000435539 TRAK2O60296 914 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 CCDC146Q8IYE0 955 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 ARXQ96QS3 562 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 USP35Q9P2H5 1018 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 PCDH11XQ9BZA7 1347 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 PCDH11YQ9BZA8 1340 aa10.81□□□□□ -0.68
AL441943.1-201ENST00000435539 LRP6O75581 1613 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 RBM6P78332 1123 aaKnown RBP10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 DDB1Q16531 1140 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 MTHFSDQ2M296 383 aaKnown RBP10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 MORN1Q5T089 497 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 PRM3Q9NNZ6 103 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 RGPD1P0DJD0 1748 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 IL16Q14005 1332 aa10.8□□□□□ -0.68
AL441943.1-201ENST00000435539 SOCS7O14512 581 aa10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 HMGB2P26583 209 aaKnown RBP10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 PHACTR3Q96KR7 559 aa10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
AL441943.1-201ENST00000435539 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 ATRNO75882 1429 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 E9PSI1 815 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 RXRBP28702 533 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 Q3C1V9 767 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.78□□□□□ -0.68
AL441943.1-201ENST00000435539 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 ERVV-2B6SEH9 535 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 CFAP99D6REC4 459 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 PHKG2P15735 406 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 SLC27A5Q9Y2P5 690 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
AL441943.1-201ENST00000435539 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 GNAI1P63096 354 aa10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 TEFQ10587 303 aa10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 ARID3AQ99856 593 aa10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 GDPD2Q9HCC8 539 aa10.76□□□□□ -0.69
AL441943.1-201ENST00000435539 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 A0A0G2JS52 829 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 ABL2P42684 1182 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 APLP1P51693 650 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 MYT1Q01538 1121 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 RETREG3Q86VR2 466 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 PRR7Q8TB68 274 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 DDX54Q8TDD1 881 aaKnown RBP10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms