RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 LRRC41Q15345 812 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 TKFCQ3LXA3 575 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 LILRB2Q8N423 598 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 TCEAL9Q9UHQ7 104 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 AQRO60306 1485 aaKnown RBP eCLIP7.56□□□□□ -1.27e-6■□□□□ 9.9
VRK2-206ENST00000435505 ZBTB39O15060 712 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 FAM43BQ6ZT52 329 aaPredicted RBP7.56□□□□□ -1.2
VRK2-206ENST00000435505 KHSRPQ92945 711 aaKnown RBP eCLIP7.56□□□□□ -1.21e-6■■■□□ 18
VRK2-206ENST00000435505 DOLKQ9UPQ8 538 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 UACAQ9BZF9 1416 aa7.56□□□□□ -1.2
VRK2-206ENST00000435505 LRRC9Q6ZRR7 1453 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 CFAP43Q8NDM7 1665 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 GALR2O43603 387 aaPredicted RBP7.55□□□□□ -1.2
VRK2-206ENST00000435505 PTCD1O75127 700 aaKnown RBP7.55□□□□□ -1.2
VRK2-206ENST00000435505 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
VRK2-206ENST00000435505 GNALP38405 381 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 CHMP4BP1P59074 171 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 SYCP2LQ5T4T6 812 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 GPRASP2Q96D09 838 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 PTPN23Q9H3S7 1636 aa7.55□□□□□ -1.2
VRK2-206ENST00000435505 NBPF26B4DH59 902 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 PPP1R12AO14974 1030 aaPredicted RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 BECN1Q14457 450 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 PNISRQ8TF01 805 aaKnown RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 CCDC94Q9BW85 323 aaPredicted RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 LRPPRCP42704 1394 aaKnown RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 PRXQ9BXM0 1461 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 MASP1P48740 699 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 ANKS3Q6ZW76 656 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 CENPQQ7L2Z9 268 aaPredicted RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 MTERF4Q7Z6M4 381 aaKnown RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
VRK2-206ENST00000435505 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
VRK2-206ENST00000435505 KIF20AO95235 890 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 LDHAP00338 332 aaKnown RBP7.53□□□□□ -1.2
VRK2-206ENST00000435505 SWT1Q5T5J6 900 aaKnown RBP7.53□□□□□ -1.2
VRK2-206ENST00000435505 C20orf194Q5TEA3 1177 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 ZSCAN30Q86W11 494 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 DMRTB1Q96MA1 342 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 PRKAB1Q9Y478 270 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 BDNFP23560 247 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 TNNT2P45379 298 aaPredicted RBP7.53□□□□□ -1.2
VRK2-206ENST00000435505 PROX2Q3B8N5 592 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 CNTN3Q9P232 1028 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 AK5Q9Y6K8 562 aa7.53□□□□□ -1.2
VRK2-206ENST00000435505 PTPN12Q05209 780 aaKnown RBP7.52□□□□□ -1.2
VRK2-206ENST00000435505 PUS10Q3MIT2 529 aaKnown RBP7.52□□□□□ -1.2
VRK2-206ENST00000435505 GAS2L3Q86XJ1 694 aa7.52□□□□□ -1.2
VRK2-206ENST00000435505 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.2
VRK2-206ENST00000435505 ADAM32Q8TC27 787 aa7.52□□□□□ -1.2
VRK2-206ENST00000435505 SFMBT1Q9UHJ3 866 aa7.52□□□□□ -1.2
VRK2-206ENST00000435505 F6X3S4 739 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 DYNC1I1O14576 645 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 KLF4O43474 513 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 LETM1O95202 739 aaPredicted RBP7.52□□□□□ -1.21
VRK2-206ENST00000435505 STAU1O95793 577 aaKnown RBP7.52□□□□□ -1.21
VRK2-206ENST00000435505 USP5P45974 858 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 ORC1Q13415 861 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
VRK2-206ENST00000435505 SECISBP2LQ93073 1101 aaKnown RBP7.52□□□□□ -1.21
VRK2-206ENST00000435505 GTPBP4Q9BZE4 634 aaKnown RBP7.52□□□□□ -1.21
VRK2-206ENST00000435505 SEC24BO95487 1268 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 PPP4CP60510 307 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 LMOD3Q0VAK6 560 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 DHX8Q14562 1220 aaKnown RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 DESI1Q6ICB0 168 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 PI16Q6UXB8 463 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 KIAA0907Q7Z7F0 614 aaPredicted RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 DNAJC7Q99615 494 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 ISY1Q9ULR0 285 aaKnown RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 OPLAHO14841 1288 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 SSBP05455 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
VRK2-206ENST00000435505 PTMSP20962 102 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 MSNP26038 577 aaKnown RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 BRDTQ58F21 947 aaPredicted RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 RNF19BQ6ZMZ0 732 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 EMID1Q96A84 441 aaPredicted RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 FRMD6Q96NE9 622 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 MTA3Q9BTC8 594 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 TMX4Q9H1E5 349 aaPredicted RBP7.51□□□□□ -1.21
VRK2-206ENST00000435505 HOMER2Q9NSB8 354 aa7.51□□□□□ -1.21
VRK2-206ENST00000435505 BCORL1Q5H9F3 1711 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 NUDT7P0C024 238 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 POU3F3P20264 500 aaPredicted RBP7.5□□□□□ -1.21
VRK2-206ENST00000435505 CCDC173Q0VFZ6 552 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 MKL1Q969V6 931 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 ALKBH8Q96BT7 664 aaKnown RBP7.5□□□□□ -1.21
VRK2-206ENST00000435505 CITED4Q96RK1 184 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 ARPC5LQ9BPX5 153 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 TYW1Q9NV66 732 aaKnown RBP7.5□□□□□ -1.21
VRK2-206ENST00000435505 SMARCA4P51532 1647 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 SPATA31E1Q6ZUB1 1445 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 TRIM6-TRIM34B2RNG4 842 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms